Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 Q0010Q0010 387 nt9.93□□□□□ -0.82
NPL3Q01560 YHL019W-AYHL019W-A 594 nt9.92□□□□□ -0.82
NPL3Q01560 TIR3YIL011W 810 nt9.91□□□□□ -0.82
NPL3Q01560 RBG1YAL036C 1110 nt9.91□□□□□ -0.82
NPL3Q01560 AIM45YPR004C 1035 nt9.91□□□□□ -0.82
NPL3Q01560 SFA1YDL168W 1161 nt9.9□□□□□ -0.82
NPL3Q01560 NDI1YML120C 1542 nt9.9□□□□□ -0.82 RIP-Chip
NPL3Q01560 YJR154WYJR154W 1041 nt9.88□□□□□ -0.83
NPL3Q01560 COQ2YNR041C 1119 nt9.88□□□□□ -0.83
NPL3Q01560 DPS1YLL018C 1674 nt9.87□□□□□ -0.83
NPL3Q01560 SHH4YLR164W 507 nt9.86□□□□□ -0.83
NPL3Q01560 RTN2YDL204W 1182 nt9.85□□□□□ -0.83
NPL3Q01560 GLR1YPL091W 1452 nt9.84□□□□□ -0.83
NPL3Q01560 LSC2YGR244C 1284 nt9.83□□□□□ -0.84
NPL3Q01560 YKR005CYKR005C 1578 nt9.83□□□□□ -0.84
NPL3Q01560 YGR259CYGR259C 441 nt9.82□□□□□ -0.84
NPL3Q01560 PRO1YDR300C 1287 nt9.8□□□□□ -0.84
NPL3Q01560 POM34YLR018C 900 nt9.8□□□□□ -0.84 RIP-Chip
NPL3Q01560 YML089CYML089C 369 nt9.8□□□□□ -0.84
NPL3Q01560 TOM6YOR045W 186 nt9.8□□□□□ -0.84 RIP-Chip
NPL3Q01560 RPL4BYDR012W 1089 nt9.79□□□□□ -0.84
NPL3Q01560 RPL4AYBR031W 1089 nt9.79□□□□□ -0.84
NPL3Q01560 CMP2YML057W 1815 nt9.79□□□□□ -0.84
NPL3Q01560 ARP6YLR085C 1317 nt9.79□□□□□ -0.84
NPL3Q01560 RBG2YGR173W 1107 nt9.78□□□□□ -0.84
NPL3Q01560 ATG15YCR068W 1563 nt9.77□□□□□ -0.85
NPL3Q01560 CSM2YIL132C 642 nt9.77□□□□□ -0.85
NPL3Q01560 PEX2YJL210W 816 nt9.76□□□□□ -0.85 RIP-Chip
NPL3Q01560 CYT2YKL087C 675 nt9.75□□□□□ -0.85 RIP-Chip
NPL3Q01560 UTH1YKR042W 1098 nt9.75□□□□□ -0.85
NPL3Q01560 PLB1YMR008C 1995 nt9.73□□□□□ -0.85
NPL3Q01560 BIO5YNR056C 1686 nt9.72□□□□□ -0.85
NPL3Q01560 HIP1YGR191W 1812 nt9.72□□□□□ -0.85
NPL3Q01560 GAP1YKR039W 1809 nt9.72□□□□□ -0.85
NPL3Q01560 RPS14BYJL191W 417 nt9.71□□□□□ -0.86
NPL3Q01560 SDH5YOL071W 489 nt9.7□□□□□ -0.86 RIP-Chip
NPL3Q01560 NRT1YOR071C 1797 nt9.7□□□□□ -0.86
NPL3Q01560 MET28YIR017C 564 nt9.68□□□□□ -0.86
NPL3Q01560 TIF6YPR016C 738 nt9.68□□□□□ -0.86 RIP-Chip
NPL3Q01560 YLR111WYLR111W 333 nt9.66□□□□□ -0.86
NPL3Q01560 YMR226CYMR226C 804 nt9.65□□□□□ -0.86
NPL3Q01560 PBP1YGR178C 2169 nt9.65□□□□□ -0.86
NPL3Q01560 IRC24YIR036C 792 nt9.64□□□□□ -0.87
NPL3Q01560 TSC10YBR265W 963 nt9.62□□□□□ -0.87
NPL3Q01560 SNF1YDR477W 1902 nt9.62□□□□□ -0.87
NPL3Q01560 YDR510C-AYDR510C-A 117 nt9.61□□□□□ -0.87
NPL3Q01560 UTR1YJR049C 1593 nt9.59□□□□□ -0.87
NPL3Q01560 FIT3YOR383C 615 nt9.59□□□□□ -0.87
NPL3Q01560 RAD51YER095W 1203 nt9.58□□□□□ -0.88
NPL3Q01560 SAM35YHR083W 990 nt9.58□□□□□ -0.88 RIP-Chip
NPL3Q01560 RAD23YEL037C 1197 nt9.57□□□□□ -0.88
NPL3Q01560 YGR012WYGR012W 1182 nt9.56□□□□□ -0.88
NPL3Q01560 SAM1YLR180W 1149 nt9.56□□□□□ -0.88
NPL3Q01560 DIF1YLR437C 402 nt9.56□□□□□ -0.88
NPL3Q01560 RDN25-1RDN25-1 3396 nt9.55□□□□□ -0.88
NPL3Q01560 RDN25-2RDN25-2 3396 nt9.55□□□□□ -0.88
NPL3Q01560 YAR028WYAR028W 705 nt9.54□□□□□ -0.88
NPL3Q01560 PRM5YIL117C 957 nt9.53□□□□□ -0.88
NPL3Q01560 PAB1YER165W 1734 nt9.51□□□□□ -0.89
NPL3Q01560 YLR279WYLR279W 390 nt9.5□□□□□ -0.89
NPL3Q01560 HSL7YBR133C 2484 nt9.49□□□□□ -0.89
NPL3Q01560 AKR2YOR034C 2250 nt9.48□□□□□ -0.89
NPL3Q01560 ALP1YNL270C 1722 nt9.48□□□□□ -0.89
NPL3Q01560 MSB4YOL112W 1479 nt9.45□□□□□ -0.9
NPL3Q01560 MTG2YHR168W 1557 nt9.45□□□□□ -0.9
NPL3Q01560 ALD4YOR374W 1560 nt9.45□□□□□ -0.9
NPL3Q01560 RIB3YDR487C 627 nt9.44□□□□□ -0.9
NPL3Q01560 ZTA1YBR046C 1005 nt9.44□□□□□ -0.9
NPL3Q01560 BSP1YPR171W 1731 nt9.44□□□□□ -0.9
NPL3Q01560 YPL222C-AYPL222C-A 246 nt9.43□□□□□ -0.9
NPL3Q01560 SED1YDR077W 1017 nt9.42□□□□□ -0.9
NPL3Q01560 YLR437C-AYLR437C-A 228 nt9.41□□□□□ -0.9
NPL3Q01560 RSC4YKR008W 1878 nt9.38□□□□□ -0.91
NPL3Q01560 CAB5YDR196C 726 nt9.38□□□□□ -0.91 RIP-Chip
NPL3Q01560 HIF1YLL022C 1158 nt9.38□□□□□ -0.91
NPL3Q01560 LIP1YMR298W 453 nt9.38□□□□□ -0.91 RIP-Chip
NPL3Q01560 YAT1YAR035W 2064 nt9.37□□□□□ -0.91
NPL3Q01560 SPT20YOL148C 1815 nt9.36□□□□□ -0.91
NPL3Q01560 YER190C-AYER190C-A 576 nt9.36□□□□□ -0.91
NPL3Q01560 YGR296C-AYGR296C-A 576 nt9.36□□□□□ -0.91
NPL3Q01560 YML133W-AYML133W-A 576 nt9.36□□□□□ -0.91
NPL3Q01560 YNL339W-AYNL339W-A 576 nt9.36□□□□□ -0.91
NPL3Q01560 YPL283W-AYPL283W-A 576 nt9.36□□□□□ -0.91
NPL3Q01560 HXT1YHR094C 1713 nt9.36□□□□□ -0.91
NPL3Q01560 YLR349WYLR349W 507 nt9.35□□□□□ -0.91
NPL3Q01560 YNR029CYNR029C 1290 nt9.35□□□□□ -0.91
NPL3Q01560 HEL2YDR266C 1920 nt9.32□□□□□ -0.92
NPL3Q01560 GND1YHR183W 1470 nt9.32□□□□□ -0.92
NPL3Q01560 DBP1YPL119C 1854 nt9.32□□□□□ -0.92
NPL3Q01560 LOT5YKL183W 921 nt9.3□□□□□ -0.92
NPL3Q01560 PAU21YOR394W 495 nt9.3□□□□□ -0.92
NPL3Q01560 PAU22YPL282C 495 nt9.3□□□□□ -0.92
NPL3Q01560 INA1YLR413W 2028 nt9.3□□□□□ -0.92
NPL3Q01560 MAS1YLR163C 1389 nt9.28□□□□□ -0.92
NPL3Q01560 YBL086CYBL086C 1401 nt9.28□□□□□ -0.92
NPL3Q01560 FCY21YER060W 1587 nt9.26□□□□□ -0.93
NPL3Q01560 APT2YDR441C 546 nt9.26□□□□□ -0.93 RIP-Chip
NPL3Q01560 YPI1YFR003C 468 nt9.26□□□□□ -0.93 RIP-Chip
NPL3Q01560 TOA2YKL058W 369 nt9.26□□□□□ -0.93
NPL3Q01560 STE4YOR212W 1272 nt9.26□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 10.4 ms