Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 BDH1YAL060W 1149 nt10.3□□□□□ -0.76
SUB1P54000 HIF1YLL022C 1158 nt10.29□□□□□ -0.76
SUB1P54000 YNL115CYNL115C 1935 nt10.28□□□□□ -0.76
SUB1P54000 PRM5YIL117C 957 nt10.26□□□□□ -0.77
SUB1P54000 YLR415CYLR415C 339 nt10.26□□□□□ -0.77
SUB1P54000 SPT20YOL148C 1815 nt10.26□□□□□ -0.77
SUB1P54000 YMR244WYMR244W 1068 nt10.24□□□□□ -0.77
SUB1P54000 RPC82YPR190C 1965 nt10.23□□□□□ -0.77
SUB1P54000 NBP35YGL091C 987 nt10.23□□□□□ -0.77
SUB1P54000 ALD4YOR374W 1560 nt10.22□□□□□ -0.77
SUB1P54000 TIM17YJL143W 477 nt10.22□□□□□ -0.77
SUB1P54000 DAT1YML113W 747 nt10.22□□□□□ -0.77
SUB1P54000 INA1YLR413W 2028 nt10.21□□□□□ -0.77
SUB1P54000 NIT1YIL164C 600 nt10.21□□□□□ -0.77
SUB1P54000 ARP6YLR085C 1317 nt10.2□□□□□ -0.78
SUB1P54000 THI72YOR192C 1800 nt10.19□□□□□ -0.78
SUB1P54000 NRT1YOR071C 1797 nt10.19□□□□□ -0.78
SUB1P54000 YCR102CYCR102C 1107 nt10.16□□□□□ -0.78
SUB1P54000 MAE1YKL029C 2010 nt10.14□□□□□ -0.79
SUB1P54000 SGT2YOR007C 1041 nt10.14□□□□□ -0.79
SUB1P54000 YSP3YOR003W 1437 nt10.14□□□□□ -0.79
SUB1P54000 UTR1YJR049C 1593 nt10.13□□□□□ -0.79
SUB1P54000 NSG2YNL156C 900 nt10.12□□□□□ -0.79
SUB1P54000 tL(GAG)GtL(GAG)G 82 nt10.1□□□□□ -0.79
SUB1P54000 RTG1YOL067C 534 nt10.07□□□□□ -0.8
SUB1P54000 HXT10YFL011W 1641 nt10.07□□□□□ -0.8
SUB1P54000 RIM8YGL045W 1629 nt10.05□□□□□ -0.8
SUB1P54000 AAC3YBR085W 924 nt10.04□□□□□ -0.8
SUB1P54000 YLR173WYLR173W 1827 nt10.03□□□□□ -0.8
SUB1P54000 GAP1YKR039W 1809 nt10.03□□□□□ -0.8
SUB1P54000 ZRT3YKL175W 1512 nt10.02□□□□□ -0.8
SUB1P54000 MUP1YGR055W 1725 nt10.02□□□□□ -0.81
SUB1P54000 ACO2YJL200C 2370 nt10□□□□□ -0.81
SUB1P54000 SHH4YLR164W 507 nt10□□□□□ -0.81
SUB1P54000 SAM35YHR083W 990 nt9.98□□□□□ -0.81
SUB1P54000 PRO1YDR300C 1287 nt9.97□□□□□ -0.81
SUB1P54000 YJL067WYJL067W 351 nt9.97□□□□□ -0.81
SUB1P54000 LSC2YGR244C 1284 nt9.96□□□□□ -0.82
SUB1P54000 TIR3YIL011W 810 nt9.96□□□□□ -0.82
SUB1P54000 SNU66YOR308C 1764 nt9.96□□□□□ -0.82
SUB1P54000 HOL1YNR055C 1761 nt9.92□□□□□ -0.82
SUB1P54000 YGL114WYGL114W 2178 nt9.91□□□□□ -0.82
SUB1P54000 PEX25YPL112C 1185 nt9.9□□□□□ -0.82
SUB1P54000 POM34YLR018C 900 nt9.89□□□□□ -0.83
SUB1P54000 YFL066CYFL066C 1179 nt9.88□□□□□ -0.83
SUB1P54000 ATG15YCR068W 1563 nt9.88□□□□□ -0.83
SUB1P54000 HUA1YGR268C 597 nt9.87□□□□□ -0.83
SUB1P54000 VPS75YNL246W 795 nt9.87□□□□□ -0.83
SUB1P54000 YNL024CYNL024C 741 nt9.86□□□□□ -0.83
SUB1P54000 DBP1YPL119C 1854 nt9.85□□□□□ -0.83
SUB1P54000 HXT1YHR094C 1713 nt9.85□□□□□ -0.83
SUB1P54000 ADE2YOR128C 1716 nt9.85□□□□□ -0.83
SUB1P54000 NAS6YGR232W 687 nt9.85□□□□□ -0.83
SUB1P54000 YOR325WYOR325W 474 nt9.84□□□□□ -0.83
SUB1P54000 SHY1YGR112W 1170 nt9.83□□□□□ -0.84
SUB1P54000 DIF1YLR437C 402 nt9.83□□□□□ -0.84
SUB1P54000 TOM71YHR117W 1920 nt9.83□□□□□ -0.84
SUB1P54000 VPS62YGR141W 1404 nt9.82□□□□□ -0.84
SUB1P54000 ILV3YJR016C 1758 nt9.79□□□□□ -0.84
SUB1P54000 TOM6YOR045W 186 nt9.78□□□□□ -0.84
SUB1P54000 RTG2YGL252C 1767 nt9.78□□□□□ -0.84
SUB1P54000 YHL019W-AYHL019W-A 594 nt9.77□□□□□ -0.85
SUB1P54000 YML089CYML089C 369 nt9.77□□□□□ -0.85
SUB1P54000 NME1NME1 340 nt9.77□□□□□ -0.85
SUB1P54000 SFA1YDL168W 1161 nt9.76□□□□□ -0.85
SUB1P54000 RET2YFR051C 1641 nt9.75□□□□□ -0.85
SUB1P54000 YIL100C-AYIL100C-A 339 nt9.75□□□□□ -0.85
SUB1P54000 PAU7YAR020C 168 nt9.75□□□□□ -0.85
SUB1P54000 YJL045WYJL045W 1905 nt9.75□□□□□ -0.85
SUB1P54000 MLS1YNL117W 1665 nt9.74□□□□□ -0.85
SUB1P54000 MGM101YJR144W 810 nt9.74□□□□□ -0.85
SUB1P54000 YBL086CYBL086C 1401 nt9.73□□□□□ -0.85
SUB1P54000 YDR010CYDR010C 333 nt9.73□□□□□ -0.85
SUB1P54000 SFL1YOR140W 2301 nt9.73□□□□□ -0.85
SUB1P54000 TPN1YGL186C 1740 nt9.73□□□□□ -0.85
SUB1P54000 YER190C-AYER190C-A 576 nt9.72□□□□□ -0.85
SUB1P54000 YGR296C-AYGR296C-A 576 nt9.72□□□□□ -0.85
SUB1P54000 YML133W-AYML133W-A 576 nt9.72□□□□□ -0.85
SUB1P54000 YNL339W-AYNL339W-A 576 nt9.72□□□□□ -0.85
SUB1P54000 YPL283W-AYPL283W-A 576 nt9.72□□□□□ -0.85
SUB1P54000 CBK1YNL161W 2271 nt9.72□□□□□ -0.85
SUB1P54000 LIP1YMR298W 453 nt9.7□□□□□ -0.86
SUB1P54000 YMR209CYMR209C 1374 nt9.7□□□□□ -0.86
SUB1P54000 COQ8YGL119W 1506 nt9.7□□□□□ -0.86
SUB1P54000 CWC15YDR163W 528 nt9.69□□□□□ -0.86
SUB1P54000 THI6YPL214C 1623 nt9.69□□□□□ -0.86
SUB1P54000 MET8YBR213W 825 nt9.69□□□□□ -0.86
SUB1P54000 MRP20YDR405W 792 nt9.68□□□□□ -0.86
SUB1P54000 PEX2YJL210W 816 nt9.68□□□□□ -0.86
SUB1P54000 SHB17YKR043C 816 nt9.68□□□□□ -0.86
SUB1P54000 DUR3YHL016C 2208 nt9.68□□□□□ -0.86
SUB1P54000 PRE6YOL038W 765 nt9.67□□□□□ -0.86
SUB1P54000 TIF6YPR016C 738 nt9.67□□□□□ -0.86
SUB1P54000 GCD11YER025W 1584 nt9.67□□□□□ -0.86
SUB1P54000 UGP1YKL035W 1500 nt9.66□□□□□ -0.86
SUB1P54000 YEL023CYEL023C 2049 nt9.66□□□□□ -0.86
SUB1P54000 SSL2YIL143C 2532 nt9.66□□□□□ -0.86
SUB1P54000 HIS2YFR025C 1008 nt9.66□□□□□ -0.86
SUB1P54000 ARO8YGL202W 1503 nt9.66□□□□□ -0.86
SUB1P54000 URA6YKL024C 615 nt9.65□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms