Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 RDN18-1RDN18-1 1800 nt10.45□□□□□ -0.74
SHE3P38272 RDN18-2RDN18-2 1800 nt10.45□□□□□ -0.74
SHE3P38272 RPS14BYJL191W 417 nt10.45□□□□□ -0.74
SHE3P38272 TOM6YOR045W 186 nt10.45□□□□□ -0.74
SHE3P38272 POM34YLR018C 900 nt10.44□□□□□ -0.74
SHE3P38272 HIP1YGR191W 1812 nt10.41□□□□□ -0.74
SHE3P38272 NRT1YOR071C 1797 nt10.39□□□□□ -0.75
SHE3P38272 PRO1YDR300C 1287 nt10.39□□□□□ -0.75
SHE3P38272 RAD23YEL037C 1197 nt10.39□□□□□ -0.75
SHE3P38272 PEX2YJL210W 816 nt10.39□□□□□ -0.75
SHE3P38272 FUR4YBR021W 1902 nt10.39□□□□□ -0.75
SHE3P38272 TSC10YBR265W 963 nt10.38□□□□□ -0.75
SHE3P38272 ATG15YCR068W 1563 nt10.38□□□□□ -0.75
SHE3P38272 ARP6YLR085C 1317 nt10.37□□□□□ -0.75
SHE3P38272 RTN2YDL204W 1182 nt10.37□□□□□ -0.75
SHE3P38272 MET28YIR017C 564 nt10.37□□□□□ -0.75
SHE3P38272 SAM1YLR180W 1149 nt10.33□□□□□ -0.76
SHE3P38272 TIF6YPR016C 738 nt10.33□□□□□ -0.76
SHE3P38272 YGR012WYGR012W 1182 nt10.31□□□□□ -0.76
SHE3P38272 FIT3YOR383C 615 nt10.3□□□□□ -0.76
SHE3P38272 GAP1YKR039W 1809 nt10.3□□□□□ -0.76
SHE3P38272 RIB3YDR487C 627 nt10.25□□□□□ -0.77
SHE3P38272 PLB1YMR008C 1995 nt10.25□□□□□ -0.77
SHE3P38272 YGR259CYGR259C 441 nt10.23□□□□□ -0.77
SHE3P38272 YLR437C-AYLR437C-A 228 nt10.23□□□□□ -0.77
SHE3P38272 YKR005CYKR005C 1578 nt10.22□□□□□ -0.77
SHE3P38272 YLR279WYLR279W 390 nt10.21□□□□□ -0.77
SHE3P38272 UME6YDR207C 2511 nt10.2□□□□□ -0.78
SHE3P38272 YPL222C-AYPL222C-A 246 nt10.19□□□□□ -0.78
SHE3P38272 BMT6YLR063W 1098 nt10.17□□□□□ -0.78
SHE3P38272 PRP4YPR178W 1398 nt10.15□□□□□ -0.78
SHE3P38272 YAR028WYAR028W 705 nt10.15□□□□□ -0.78
SHE3P38272 HSP60YLR259C 1719 nt10.15□□□□□ -0.78
SHE3P38272 DIF1YLR437C 402 nt10.14□□□□□ -0.79
SHE3P38272 MSB4YOL112W 1479 nt10.14□□□□□ -0.79
SHE3P38272 ALP1YNL270C 1722 nt10.13□□□□□ -0.79
SHE3P38272 CAB5YDR196C 726 nt10.12□□□□□ -0.79
SHE3P38272 SAM35YHR083W 990 nt10.12□□□□□ -0.79
SHE3P38272 UTR1YJR049C 1593 nt10.11□□□□□ -0.79
SHE3P38272 DPS1YLL018C 1674 nt10.07□□□□□ -0.8
SHE3P38272 AKR2YOR034C 2250 nt10.07□□□□□ -0.8
SHE3P38272 YPI1YFR003C 468 nt10.06□□□□□ -0.8
SHE3P38272 MTG2YHR168W 1557 nt10.05□□□□□ -0.8
SHE3P38272 GND1YHR183W 1470 nt10.04□□□□□ -0.8
SHE3P38272 IRC24YIR036C 792 nt10.04□□□□□ -0.8
SHE3P38272 LOT5YKL183W 921 nt10.03□□□□□ -0.8
SHE3P38272 BOR1YNL275W 1731 nt10.02□□□□□ -0.8
SHE3P38272 FUN14YAL008W 597 nt10.02□□□□□ -0.81
SHE3P38272 ZTA1YBR046C 1005 nt10.02□□□□□ -0.81
SHE3P38272 YJL195CYJL195C 702 nt10.01□□□□□ -0.81
SHE3P38272 STE4YOR212W 1272 nt10□□□□□ -0.81
SHE3P38272 ADH1YOL086C 1047 nt9.99□□□□□ -0.81
SHE3P38272 SED1YDR077W 1017 nt9.98□□□□□ -0.81
SHE3P38272 APT2YDR441C 546 nt9.96□□□□□ -0.82
SHE3P38272 PRM5YIL117C 957 nt9.96□□□□□ -0.82
SHE3P38272 AAC1YMR056C 930 nt9.95□□□□□ -0.82
SHE3P38272 FCY21YER060W 1587 nt9.95□□□□□ -0.82
SHE3P38272 SMM1YNR015W 1155 nt9.94□□□□□ -0.82
SHE3P38272 YNR029CYNR029C 1290 nt9.93□□□□□ -0.82
SHE3P38272 YLR349WYLR349W 507 nt9.92□□□□□ -0.82
SHE3P38272 RAD51YER095W 1203 nt9.91□□□□□ -0.82
SHE3P38272 LIP1YMR298W 453 nt9.91□□□□□ -0.82
SHE3P38272 LSB3YFR024C-A 1380 nt9.9□□□□□ -0.82
SHE3P38272 ALD4YOR374W 1560 nt9.89□□□□□ -0.83
SHE3P38272 YER190C-AYER190C-A 576 nt9.89□□□□□ -0.83
SHE3P38272 YGR296C-AYGR296C-A 576 nt9.89□□□□□ -0.83
SHE3P38272 YML133W-AYML133W-A 576 nt9.89□□□□□ -0.83
SHE3P38272 YNL339W-AYNL339W-A 576 nt9.89□□□□□ -0.83
SHE3P38272 YPL283W-AYPL283W-A 576 nt9.89□□□□□ -0.83
SHE3P38272 YEL008WYEL008W 381 nt9.88□□□□□ -0.83
SHE3P38272 ADH7YCR105W 1086 nt9.87□□□□□ -0.83
SHE3P38272 DBP1YPL119C 1854 nt9.85□□□□□ -0.83
SHE3P38272 HXT1YHR094C 1713 nt9.85□□□□□ -0.83
SHE3P38272 Q0182Q0182 405 nt9.83□□□□□ -0.84
SHE3P38272 PAU15YIR041W 375 nt9.83□□□□□ -0.84
SHE3P38272 PRY1YJL079C 900 nt9.83□□□□□ -0.84
SHE3P38272 SNF1YDR477W 1902 nt9.83□□□□□ -0.84
SHE3P38272 UGA4YDL210W 1716 nt9.82□□□□□ -0.84
SHE3P38272 RIB2YOL066C 1776 nt9.8□□□□□ -0.84
SHE3P38272 HXT12YIL170W 1374 nt9.8□□□□□ -0.84
SHE3P38272 VRG4YGL225W 1014 nt9.79□□□□□ -0.84
SHE3P38272 CPD1YGR247W 720 nt9.79□□□□□ -0.84
SHE3P38272 HIF1YLL022C 1158 nt9.78□□□□□ -0.84
SHE3P38272 GPN2YOR262W 1044 nt9.78□□□□□ -0.84
SHE3P38272 BRR1YPR057W 1026 nt9.78□□□□□ -0.84
SHE3P38272 YBL086CYBL086C 1401 nt9.78□□□□□ -0.84
SHE3P38272 MEP3YPR138C 1470 nt9.78□□□□□ -0.84
SHE3P38272 LEU9YOR108W 1815 nt9.77□□□□□ -0.84
SHE3P38272 YPL251WYPL251W 303 nt9.77□□□□□ -0.85
SHE3P38272 TOA2YKL058W 369 nt9.76□□□□□ -0.85
SHE3P38272 RPM1RPM1 483 nt9.75□□□□□ -0.85
SHE3P38272 YMR103CYMR103C 363 nt9.72□□□□□ -0.85
SHE3P38272 LSB5YCL034W 1065 nt9.72□□□□□ -0.85
SHE3P38272 TRT2tT(CGU)K 72 nt9.69□□□□□ -0.86
SHE3P38272 NUC1YJL208C 990 nt9.69□□□□□ -0.86
SHE3P38272 tS(GCU)LtS(GCU)L 80 nt9.68□□□□□ -0.86
SHE3P38272 YJL055WYJL055W 738 nt9.68□□□□□ -0.86
SHE3P38272 SHY1YGR112W 1170 nt9.67□□□□□ -0.86
SHE3P38272 SSN3YPL042C 1668 nt9.67□□□□□ -0.86
SHE3P38272 GND2YGR256W 1479 nt9.66□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 50 ms