Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
MCM4P33991 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.06■■■□□ 2.72
MCM4P33991 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
MCM4P33991 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
MCM4P33991 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
MCM4P33991 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
MCM4P33991 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
MCM4P33991 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
MCM4P33991 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
MCM4P33991 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.99■■■□□ 2.71
MCM4P33991 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
MCM4P33991 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
MCM4P33991 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
MCM4P33991 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
MCM4P33991 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
MCM4P33991 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
MCM4P33991 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
MCM4P33991 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
MCM4P33991 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
MCM4P33991 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
MCM4P33991 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.89■■■□□ 2.7
MCM4P33991 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
MCM4P33991 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.88■■■□□ 2.69
MCM4P33991 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
MCM4P33991 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
MCM4P33991 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
MCM4P33991 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
MCM4P33991 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
MCM4P33991 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
MCM4P33991 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
MCM4P33991 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
MCM4P33991 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
MCM4P33991 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
MCM4P33991 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.79■■■□□ 2.68
MCM4P33991 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
MCM4P33991 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
MCM4P33991 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
MCM4P33991 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
MCM4P33991 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
MCM4P33991 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
MCM4P33991 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
MCM4P33991 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.73■■■□□ 2.67
MCM4P33991 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.71■■■□□ 2.67
MCM4P33991 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
MCM4P33991 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
MCM4P33991 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
MCM4P33991 ST7-AS1-201ENST00000456775 1889 ntBASIC31.69■■■□□ 2.66
MCM4P33991 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
MCM4P33991 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
MCM4P33991 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.68■■■□□ 2.66
MCM4P33991 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
MCM4P33991 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.67■■■□□ 2.66
MCM4P33991 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
MCM4P33991 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.67■■■□□ 2.66
MCM4P33991 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
MCM4P33991 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
MCM4P33991 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
MCM4P33991 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
MCM4P33991 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
MCM4P33991 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
MCM4P33991 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
MCM4P33991 AP002365.1-201ENST00000603448 772 ntBASIC31.61■■■□□ 2.65
MCM4P33991 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
MCM4P33991 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.6■■■□□ 2.65
MCM4P33991 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.58■■■□□ 2.65
MCM4P33991 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
MCM4P33991 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
MCM4P33991 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
MCM4P33991 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
MCM4P33991 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
MCM4P33991 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
MCM4P33991 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.54■■■□□ 2.64
MCM4P33991 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.54■■■□□ 2.64
MCM4P33991 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.54■■■□□ 2.64
MCM4P33991 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.53■■■□□ 2.64
MCM4P33991 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
MCM4P33991 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
MCM4P33991 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.51■■■□□ 2.64
MCM4P33991 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
MCM4P33991 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
MCM4P33991 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.5■■■□□ 2.63
MCM4P33991 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.49■■■□□ 2.63
MCM4P33991 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MCM4P33991 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.49■■■□□ 2.63
MCM4P33991 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
MCM4P33991 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
MCM4P33991 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.47■■■□□ 2.63
MCM4P33991 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
MCM4P33991 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.46■■■□□ 2.63
MCM4P33991 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.46■■■□□ 2.63
MCM4P33991 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
MCM4P33991 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
MCM4P33991 AC142086.6-201ENST00000621154 1765 ntBASIC31.45■■■□□ 2.63
MCM4P33991 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.45■■■□□ 2.63
MCM4P33991 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
MCM4P33991 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
MCM4P33991 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
MCM4P33991 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
MCM4P33991 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.44■■■□□ 2.62
MCM4P33991 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms