Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 RIB3YDR487C 627 nt16.16■□□□□ 0.18
UFD4P33202 DUT1YBR252W 444 nt16.16■□□□□ 0.18
UFD4P33202 PEX2YJL210W 816 nt16.15■□□□□ 0.18
UFD4P33202 PTK1YKL198C 1989 nt16.13■□□□□ 0.17
UFD4P33202 TOM6YOR045W 186 nt16.12■□□□□ 0.17
UFD4P33202 CPD1YGR247W 720 nt16.11■□□□□ 0.17
UFD4P33202 GOR1YNL274C 1053 nt16.11■□□□□ 0.17
UFD4P33202 RAX1YOR301W 1308 nt16.11■□□□□ 0.17
UFD4P33202 MSB4YOL112W 1479 nt16.05■□□□□ 0.16
UFD4P33202 PUP1YOR157C 786 nt16.03■□□□□ 0.16
UFD4P33202 NRT1YOR071C 1797 nt16.03■□□□□ 0.16
UFD4P33202 HIP1YGR191W 1812 nt16.03■□□□□ 0.16
UFD4P33202 YEL008WYEL008W 381 nt16.03■□□□□ 0.16
UFD4P33202 AGP1YCL025C 1902 nt16.01■□□□□ 0.15
UFD4P33202 YFL054CYFL054C 1941 nt16.01■□□□□ 0.15
UFD4P33202 SEN2YLR105C 1134 nt16■□□□□ 0.15
UFD4P33202 TIR3YIL011W 810 nt15.97■□□□□ 0.15
UFD4P33202 AAC1YMR056C 930 nt15.97■□□□□ 0.15
UFD4P33202 YPI1YFR003C 468 nt15.93■□□□□ 0.14
UFD4P33202 LOT5YKL183W 921 nt15.93■□□□□ 0.14
UFD4P33202 NAP1YKR048C 1254 nt15.9■□□□□ 0.14
UFD4P33202 NBP35YGL091C 987 nt15.86■□□□□ 0.13
UFD4P33202 YPL222C-AYPL222C-A 246 nt15.86■□□□□ 0.13
UFD4P33202 POM34YLR018C 900 nt15.84■□□□□ 0.13
UFD4P33202 TIF6YPR016C 738 nt15.82■□□□□ 0.12
UFD4P33202 CCA1YER168C 1641 nt15.79■□□□□ 0.12
UFD4P33202 PRO1YDR300C 1287 nt15.78■□□□□ 0.12
UFD4P33202 MET28YIR017C 564 nt15.77■□□□□ 0.11
UFD4P33202 GND1YHR183W 1470 nt15.77■□□□□ 0.11
UFD4P33202 ATG15YCR068W 1563 nt15.76■□□□□ 0.11
UFD4P33202 APT2YDR441C 546 nt15.76■□□□□ 0.11
UFD4P33202 YJR114WYJR114W 393 nt15.76■□□□□ 0.11
UFD4P33202 PGC1YPL206C 966 nt15.75■□□□□ 0.11
UFD4P33202 PAU5YFL020C 369 nt15.71■□□□□ 0.1
UFD4P33202 YML089CYML089C 369 nt15.7■□□□□ 0.1
UFD4P33202 AQY2YLL052C 450 nt15.69■□□□□ 0.1
UFD4P33202 SWE1YJL187C 2460 nt15.68■□□□□ 0.1
UFD4P33202 RIB2YOL066C 1776 nt15.65■□□□□ 0.1
UFD4P33202 YJL064WYJL064W 396 nt15.64■□□□□ 0.09
UFD4P33202 YBR232CYBR232C 360 nt15.62■□□□□ 0.09
UFD4P33202 FIT3YOR383C 615 nt15.61■□□□□ 0.09
UFD4P33202 ZTA1YBR046C 1005 nt15.59■□□□□ 0.09
UFD4P33202 DUS1YML080W 1272 nt15.59■□□□□ 0.09
UFD4P33202 SLG1YOR008C 1137 nt15.59■□□□□ 0.09
UFD4P33202 LSB3YFR024C-A 1380 nt15.57■□□□□ 0.08
UFD4P33202 PAU19YMR325W 375 nt15.57■□□□□ 0.08
UFD4P33202 LSC2YGR244C 1284 nt15.55■□□□□ 0.08
UFD4P33202 SMM1YNR015W 1155 nt15.55■□□□□ 0.08
UFD4P33202 PAC11YDR488C 1602 nt15.52■□□□□ 0.08
UFD4P33202 RDN18-1RDN18-1 1800 nt15.52■□□□□ 0.08
UFD4P33202 RDN18-2RDN18-2 1800 nt15.52■□□□□ 0.08
UFD4P33202 ALD4YOR374W 1560 nt15.47■□□□□ 0.07
UFD4P33202 TIM44YIL022W 1296 nt15.46■□□□□ 0.07
UFD4P33202 AKR2YOR034C 2250 nt15.46■□□□□ 0.07
UFD4P33202 STR3YGL184C 1398 nt15.45■□□□□ 0.06
UFD4P33202 STP3YLR375W 1032 nt15.4■□□□□ 0.06
UFD4P33202 PRY1YJL079C 900 nt15.39■□□□□ 0.05
UFD4P33202 GAP1YKR039W 1809 nt15.37■□□□□ 0.05
UFD4P33202 YJL055WYJL055W 738 nt15.37■□□□□ 0.05
UFD4P33202 ERG6YML008C 1152 nt15.37■□□□□ 0.05
UFD4P33202 TIP1YBR067C 633 nt15.34■□□□□ 0.05
UFD4P33202 YAR028WYAR028W 705 nt15.32■□□□□ 0.04
UFD4P33202 RIB1YBL033C 1038 nt15.32■□□□□ 0.04
UFD4P33202 FCY21YER060W 1587 nt15.31■□□□□ 0.04
UFD4P33202 HXT12YIL170W 1374 nt15.31■□□□□ 0.04
UFD4P33202 VRG4YGL225W 1014 nt15.3■□□□□ 0.04
UFD4P33202 ARP6YLR085C 1317 nt15.3■□□□□ 0.04
UFD4P33202 ALP1YNL270C 1722 nt15.28■□□□□ 0.04
UFD4P33202 UGA4YDL210W 1716 nt15.27■□□□□ 0.04
UFD4P33202 DIF1YLR437C 402 nt15.27■□□□□ 0.03
UFD4P33202 MTG2YHR168W 1557 nt15.25■□□□□ 0.03
UFD4P33202 YCL074WYCL074W 927 nt15.23■□□□□ 0.03
UFD4P33202 SOD2YHR008C 702 nt15.22■□□□□ 0.03
UFD4P33202 CCT5YJR064W 1689 nt15.22■□□□□ 0.03
UFD4P33202 FUR4YBR021W 1902 nt15.19■□□□□ 0.02
UFD4P33202 THI72YOR192C 1800 nt15.19■□□□□ 0.02
UFD4P33202 PLB1YMR008C 1995 nt15.18■□□□□ 0.02
UFD4P33202 RTN2YDL204W 1182 nt15.09■□□□□ 0.01
UFD4P33202 HSP60YLR259C 1719 nt15.08■□□□□ 0
UFD4P33202 YIA6YIL006W 1122 nt15.07■□□□□ 0
UFD4P33202 TAF13YML098W 504 nt15.05■□□□□ -0
UFD4P33202 YMR262WYMR262W 942 nt15.04■□□□□ -0
UFD4P33202 UTR1YJR049C 1593 nt15.04■□□□□ -0
UFD4P33202 POP2YNR052C 1302 nt15.03■□□□□ -0
UFD4P33202 QDR2YIL121W 1629 nt15.02□□□□□ -0.01
UFD4P33202 YER190C-AYER190C-A 576 nt15□□□□□ -0.01
UFD4P33202 YGR296C-AYGR296C-A 576 nt15□□□□□ -0.01
UFD4P33202 YML133W-AYML133W-A 576 nt15□□□□□ -0.01
UFD4P33202 YNL339W-AYNL339W-A 576 nt15□□□□□ -0.01
UFD4P33202 YPL283W-AYPL283W-A 576 nt15□□□□□ -0.01
UFD4P33202 PAR32YDL173W 888 nt14.98□□□□□ -0.01
UFD4P33202 YER152W-AYER152W-A 567 nt14.97□□□□□ -0.01
UFD4P33202 SNZ1YMR096W 894 nt14.97□□□□□ -0.01
UFD4P33202 SED1YDR077W 1017 nt14.95□□□□□ -0.02
UFD4P33202 GAL3YDR009W 1563 nt14.95□□□□□ -0.02
UFD4P33202 YJL118WYJL118W 660 nt14.95□□□□□ -0.02
UFD4P33202 TUB4YLR212C 1422 nt14.94□□□□□ -0.02
UFD4P33202 APS2YJR058C 444 nt14.92□□□□□ -0.02
UFD4P33202 CSM1YCR086W 573 nt14.88□□□□□ -0.03
UFD4P33202 YPL251WYPL251W 303 nt14.87□□□□□ -0.03
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms