Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 EIF4A2-217ENST00000475409 802 ntTSL 25.87□□□□□ -1.471e-323■■■■■ 105.4
DKC1O60832 AC019118.2-202ENST00000419347 416 ntTSL 3 BASIC13.11□□□□□ -0.313e-8■■■■■ 105.4
DKC1O60832 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.241e-15■■■■■ 105.2
DKC1O60832 TMEM11-203ENST00000583264 819 ntTSL 221.73■■□□□ 1.071e-15■■■■■ 105.2
DKC1O60832 TMEM11-205ENST00000584432 1648 ntTSL 221.71■■□□□ 1.071e-15■■■■■ 105.2
DKC1O60832 TMEM11-202ENST00000577419 1246 ntTSL 219.94■□□□□ 0.781e-15■■■■■ 105.2
DKC1O60832 TMEM11-206ENST00000584732 967 ntTSL 518.85■□□□□ 0.611e-15■■■■■ 105.2
DKC1O60832 TMEM11-204ENST00000583929 827 ntTSL 316.52■□□□□ 0.241e-15■■■■■ 105.2
DKC1O60832 SNORA50D-201ENST00000408059 134 ntBASIC15.06■□□□□ 06e-9■■■■■ 104.2
DKC1O60832 SNORA50D-202ENST00000627561 132 ntBASIC15.06■□□□□ 06e-9■■■■■ 104.2
DKC1O60832 EIF4A2-218ENST00000475653 909 ntTSL 26.83□□□□□ -1.323e-7■■■■■ 104
DKC1O60832 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.948e-8■■■■■ 103.8
DKC1O60832 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.92■■□□□ 1.268e-8■■■■■ 103.8
DKC1O60832 RNASET2-204ENST00000421787 1924 ntTSL 222.49■■□□□ 1.198e-8■■■■■ 103.8
DKC1O60832 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.25■■□□□ 1.158e-8■■■■■ 103.8
DKC1O60832 RNASET2-201ENST00000028008 1220 ntTSL 520.61■□□□□ 0.898e-8■■■■■ 103.8
DKC1O60832 RNASET2-207ENST00000478180 963 ntTSL 520.17■□□□□ 0.828e-8■■■■■ 103.8
DKC1O60832 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.628e-8■■■■■ 103.8
DKC1O60832 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.88e-8■■■■■ 103.8
DKC1O60832 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC10.09□□□□□ -0.791e-67■■■■■ 103.7
DKC1O60832 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.15□□□□□ -1.111e-67■■■■■ 103.7
DKC1O60832 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.58□□□□□ -1.21e-67■■■■■ 103.7
DKC1O60832 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.56□□□□□ -1.21e-67■■■■■ 103.7
DKC1O60832 SNORA63D-201ENST00000364359 132 ntBASIC1.78□□□□□ -2.122e-77■■■■■ 103.5
DKC1O60832 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.55■□□□□ 0.569e-12■■■■■ 103.4
DKC1O60832 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.339e-12■■■■■ 103.4
DKC1O60832 TSPAN9-204ENST00000444315 570 ntTSL 418.85■□□□□ 0.614e-23■■■■■ 103
DKC1O60832 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.214e-23■■■■■ 103
DKC1O60832 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.324e-23■■■■■ 103
DKC1O60832 SORL1-210ENST00000532451 2165 ntTSL 1 (best)25.46■■□□□ 1.679e-21■■■■■ 102.7
DKC1O60832 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.359e-21■■■■■ 102.7
DKC1O60832 LPCAT1-202ENST00000475622 5610 ntTSL 519.66■□□□□ 0.741e-7■■■■■ 102
DKC1O60832 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.071e-7■■■■■ 102
DKC1O60832 MIR3651-201ENST00000630427 90 ntBASIC3.6□□□□□ -1.831e-323■■■■■ 101.9
DKC1O60832 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.131e-6■■■■■ 101.2
DKC1O60832 RORA-206ENST00000557822 545 ntTSL 416.9■□□□□ 0.31e-6■■■■■ 101.2
DKC1O60832 RORA-210ENST00000559343 577 ntTSL 414.29□□□□□ -0.121e-6■■■■■ 101.2
DKC1O60832 RORA-212ENST00000560004 544 ntTSL 412.76□□□□□ -0.371e-6■■■■■ 101.2
DKC1O60832 RORA-207ENST00000558234 3910 ntTSL 1 (best)12.73□□□□□ -0.371e-6■■■■■ 101.2
DKC1O60832 RORA-205ENST00000551975 749 ntTSL 311.25□□□□□ -0.611e-6■■■■■ 101.2
DKC1O60832 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.68□□□□□ -1.021e-6■■■■■ 101.2
DKC1O60832 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.28□□□□□ -1.241e-6■■■■■ 101.2
DKC1O60832 SNORA8.3-201ENST00000384679 139 ntBASIC0.49□□□□□ -2.337e-18■■■■■ 100.7
DKC1O60832 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC12.07□□□□□ -0.482e-70■■■■■ 99.8
DKC1O60832 SRCAP-205ENST00000483083 5937 ntTSL 212.01□□□□□ -0.492e-70■■■■■ 99.8
DKC1O60832 SNORA30-201ENST00000384028 129 ntBASIC8.92□□□□□ -0.982e-70■■■■■ 99.8
DKC1O60832 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.032e-70■■■■■ 99.8
DKC1O60832 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.032e-70■■■■■ 99.8
DKC1O60832 ASGR1-206ENST00000573596 2083 ntTSL 520.03■□□□□ 0.81e-42■■■■■ 99.2
DKC1O60832 MED24-209ENST00000491466 957 ntTSL 513.98□□□□□ -0.174e-22■■■■■ 98.7
DKC1O60832 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.421e-323■■■■■ 98.5
DKC1O60832 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.261e-323■■■■■ 98.5
DKC1O60832 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.891e-323■■■■■ 98.5
DKC1O60832 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.651e-323■■■■■ 98.5
DKC1O60832 YY1AP1-218ENST00000454523 810 ntAPPRIS ALT2 TSL 218.99■□□□□ 0.631e-323■■■■■ 98.5
DKC1O60832 YY1AP1-217ENST00000443231 932 ntAPPRIS ALT2 TSL 317.9■□□□□ 0.461e-323■■■■■ 98.5
DKC1O60832 YY1AP1-207ENST00000361140 2701 ntTSL 1 (best)17.49■□□□□ 0.391e-323■■■■■ 98.5
DKC1O60832 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.31e-323■■■■■ 98.5
DKC1O60832 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.31e-323■■■■■ 98.5
DKC1O60832 YY1AP1-221ENST00000476093 1037 ntTSL 316.72■□□□□ 0.271e-323■■■■■ 98.5
DKC1O60832 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.251e-323■■■■■ 98.5
DKC1O60832 YY1AP1-220ENST00000476027 927 ntTSL 315.61■□□□□ 0.091e-323■■■■■ 98.5
DKC1O60832 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.071e-323■■■■■ 98.5
DKC1O60832 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.081e-323■■■■■ 98.5
DKC1O60832 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.381e-323■■■■■ 98.5
DKC1O60832 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.411e-323■■■■■ 98.5
DKC1O60832 YY1AP1-204ENST00000354691 2498 ntTSL 212.05□□□□□ -0.481e-323■■■■■ 98.5
DKC1O60832 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.941e-323■■■■■ 98.5
DKC1O60832 YY1AP1-215ENST00000436865 2684 ntTSL 1 (best)9.08□□□□□ -0.961e-323■■■■■ 98.5
DKC1O60832 YY1AP1-225ENST00000496324 714 ntTSL 56.59□□□□□ -1.351e-323■■■■■ 98.5
DKC1O60832 YY1AP1-224ENST00000493625 958 ntTSL 55.27□□□□□ -1.571e-323■■■■■ 98.5
DKC1O60832 YY1AP1-219ENST00000466366 374 ntTSL 53.34□□□□□ -1.871e-323■■■■■ 98.5
DKC1O60832 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.46■□□□□ 0.872e-7■■■■■ 97.7
DKC1O60832 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.75■□□□□ 0.752e-7■■■■■ 97.7
DKC1O60832 TGFBR3-205ENST00000468996 569 ntTSL 411.92□□□□□ -0.51e-17■■■■■ 97.3
DKC1O60832 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.029e-7■■■■■ 97.2
DKC1O60832 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.139e-7■■■■■ 97.2
DKC1O60832 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.79■□□□□ 0.441e-323■■■■■ 97.2
DKC1O60832 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.79■□□□□ 0.441e-323■■■■■ 97.2
DKC1O60832 SNHG8-203ENST00000602520 327 ntTSL 28.44□□□□□ -1.061e-323■■■■■ 97.2
DKC1O60832 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.87□□□□□ -1.311e-323■■■■■ 97.2
DKC1O60832 SNHG8-204ENST00000602573 570 ntTSL 25.21□□□□□ -1.581e-323■■■■■ 97.2
DKC1O60832 SNORA24-201ENST00000384096 131 ntBASIC0.59□□□□□ -2.311e-323■■■■■ 97.2
DKC1O60832 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.64■□□□□ 0.893e-8■■■■■ 97.2
DKC1O60832 EIF4A2-226ENST00000497177 849 ntTSL 56.04□□□□□ -1.441e-323■■■■■ 96.7
DKC1O60832 EIF4A2-222ENST00000492144 993 ntTSL 25.84□□□□□ -1.472e-7■■■■■ 95.2
DKC1O60832 EIF4A2-216ENST00000468362 1356 ntTSL 25.22□□□□□ -1.572e-7■■■■■ 95.2
DKC1O60832 SNORA63-201ENST00000363450 132 ntBASIC-0.07□□□□□ -2.421e-323■■■■■ 94.6
DKC1O60832 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.02■□□□□ 0.83e-42■■■■■ 94.2
DKC1O60832 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.243e-42■■■■■ 94.2
DKC1O60832 PARP16-205ENST00000560149 823 ntTSL 511.83□□□□□ -0.523e-42■■■■■ 94.2
DKC1O60832 PARP16-203ENST00000558873 838 ntTSL 58.06□□□□□ -1.123e-42■■■■■ 94.2
DKC1O60832 SNORA24B-201ENST00000384176 131 ntBASIC-1.36□□□□□ -2.633e-42■■■■■ 94.2
DKC1O60832 RNASET2-202ENST00000358165 2445 ntTSL 218.25■□□□□ 0.511e-7■■■■■ 94
DKC1O60832 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.88■■□□□ 1.091e-323■■■■■ 93.9
DKC1O60832 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.481e-323■■■■■ 93.9
DKC1O60832 SNORA74B-201ENST00000391100 201 ntBASIC10.32□□□□□ -0.761e-323■■■■■ 93.9
DKC1O60832 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.75□□□□□ -1.171e-323■■■■■ 93.9
DKC1O60832 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21e-6■■■■■ 93.1
DKC1O60832 ATE1-206ENST00000481784 326 ntTSL 52.52□□□□□ -2.011e-13■■■■■ 92.5
Retrieved 100 of 8,567 protein–RNA pairs in 201.2 ms