Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CTCFL-209ENST00000433949 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 ADAM22-201ENST00000265727 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 RBM24-201ENST00000318204 2394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 TMEM18-202ENST00000355654 2376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 MAGEB17-201ENST00000400003 1379 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 PRICKLE1-215ENST00000640055 3778 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.93□□□□□ -0.34
LMO3Q8TAP4 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 ATP6V1H-207ENST00000520188 1967 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 TRIM40-205ENST00000307859 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 MDH2-201ENST00000315758 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 FAM95B1-212ENST00000592873 4692 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 KRTAP4-2-201ENST00000377726 763 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AC098657.1-201ENST00000416270 1135 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 TUBB8P9-201ENST00000422534 1276 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 KIF9-204ENST00000425853 740 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 TUBB8P10-201ENST00000430210 1279 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 CA5BP1-205ENST00000435806 1064 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AL359692.1-201ENST00000451069 265 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AC114495.2-201ENST00000452686 437 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 GM2AP1-201ENST00000491450 521 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 ALDOAP1-201ENST00000491506 1078 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 ITIH1-211ENST00000537050 2493 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AC006236.1-201ENST00000576249 797 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 RN7SL750P-201ENST00000582814 238 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AC026367.1-201ENST00000605329 611 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 FMO1-208ENST00000617670 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AP006621.5-202ENST00000623692 636 ntBASIC12.92□□□□□ -0.34
LMO3Q8TAP4 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 FAM133B-203ENST00000438306 2434 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 MEI1-201ENST00000401548 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 LINC02003-201ENST00000577573 1833 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 CASQ2-201ENST00000261448 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 TMEM107-208ENST00000532998 2358 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 NR2F2-203ENST00000421109 2214 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO3Q8TAP4 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 CEP89-204ENST00000590597 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 MYCNOS-202ENST00000641263 1313 ntBASIC12.91□□□□□ -0.34
LMO3Q8TAP4 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 FAM47A-201ENST00000346193 2556 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 TRIM23-203ENST00000381018 1855 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 ZNF438-204ENST00000413025 3106 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AC113208.3-201ENST00000637356 2523 ntBASIC12.91□□□□□ -0.34
LMO3Q8TAP4 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 ZNF581-201ENST00000270451 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 IGHV7-81-201ENST00000390639 405 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AC005838.1-201ENST00000430712 233 ntBASIC12.91□□□□□ -0.34
LMO3Q8TAP4 TGIF2P1-201ENST00000435390 685 ntBASIC12.91□□□□□ -0.34
LMO3Q8TAP4 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 LHFPL3-AS1-206ENST00000449764 1196 ntTSL 5 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 RN7SL672P-201ENST00000474091 317 ntBASIC12.91□□□□□ -0.34
LMO3Q8TAP4 EEF1GP2-201ENST00000509352 1243 ntBASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AC127537.3-201ENST00000566532 749 ntBASIC12.91□□□□□ -0.34
LMO3Q8TAP4 LINC02184-201ENST00000568121 552 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 AC015818.3-201ENST00000583797 589 ntBASIC12.91□□□□□ -0.34
LMO3Q8TAP4 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO3Q8TAP4 ZNF581-204ENST00000588537 1100 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms