Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AL034399.2-201ENST00000430140 2090 ntTSL 2 BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 AC073335.2-201ENST00000610177 3441 ntBASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 GBP1P1-201ENST00000394662 1740 ntBASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.32□□□□□ -0.6
PRICKLE4Q2TBC4 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AP001469.3-202ENST00000430259 2014 ntTSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 ZNF442-203ENST00000438182 1906 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 ACSBG1-214ENST00000560817 2462 ntTSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 TRIM49B-201ENST00000332682 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 IMPDH1P10-201ENST00000440965 1542 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 CXorf56-201ENST00000320339 2372 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 C17orf64-201ENST00000269127 950 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 UROS-201ENST00000368774 744 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 HOTAIRM1-202ENST00000428939 889 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 TGIF2P1-201ENST00000435390 685 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 PIN1P1-202ENST00000439639 301 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AC096919.1-201ENST00000472730 652 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 RN7SL304P-201ENST00000488028 301 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AC026785.1-201ENST00000505520 580 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AC090821.1-201ENST00000517380 1041 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 MPI-212ENST00000565576 1148 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 RN7SL750P-201ENST00000582814 238 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AC018755.1-201ENST00000601315 1182 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AC012486.1-201ENST00000625143 216 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 HIST1H2APS4-202ENST00000635537 681 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 CD160-201ENST00000235933 1425 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 AC138761.4-202ENST00000577956 2552 ntBASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 IFT81-209ENST00000552912 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 SEH1L-201ENST00000262124 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 ACO1-202ENST00000379923 3601 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 RABEPK-203ENST00000373544 2450 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 PTPRR-209ENST00000549308 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PRICKLE4Q2TBC4 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 ELP4-207ENST00000638347 1651 ntTSL 5 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 IMPDH1P11-201ENST00000567885 1504 ntBASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 AC097474.1-201ENST00000506481 1371 ntBASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 AC009264.1-205ENST00000439694 2160 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 HPD-201ENST00000289004 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 ZNF800-202ENST00000393312 2375 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 MS4A13-202ENST00000378186 928 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
PRICKLE4Q2TBC4 AC005102.1-201ENST00000403118 479 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms