Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 RARB-203ENST00000437042 2775 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 AL021877.1-201ENST00000457251 2194 ntBASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 ATP1A3-208ENST00000545399 3618 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 KLRK1-201ENST00000240618 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 FAM238A-201ENST00000412114 1091 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 YBX1P7-201ENST00000436766 535 ntBASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 RPSAP70-201ENST00000504462 864 ntBASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 KRT18P42-201ENST00000505048 1255 ntBASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 MBP-227ENST00000526111 581 ntTSL 4 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 AC137834.2-201ENST00000617433 701 ntBASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 CYP17A1-205ENST00000638272 1227 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 LINC02003-201ENST00000577573 1833 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 AL034399.2-201ENST00000430140 2090 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 MAEL-206ENST00000622874 1700 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 ZMYM5-201ENST00000337963 3268 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 C3orf35-205ENST00000426078 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAF6Q9Y4K3 GPR132-201ENST00000329797 3660 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 OR10H1-202ENST00000641419 4376 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 WARS2-IT1-201ENST00000423984 2060 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 PPP1R17-201ENST00000342032 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 ZNF326-201ENST00000340281 2729 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 PPEF2-201ENST00000286719 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 CICP5-201ENST00000424045 2215 ntBASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 ELF5-206ENST00000620316 2217 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 CHRNA7-224ENST00000637183 2912 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 CLDN10-203ENST00000376873 2656 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 PPP1R2P9-201ENST00000378131 880 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 PGAM1P11-201ENST00000416729 680 ntBASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 AL590068.2-201ENST00000426067 378 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 PHLDB1-217ENST00000530708 874 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 APOC1-209ENST00000592885 562 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 AC244226.1-201ENST00000631943 402 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 ZER1-201ENST00000291900 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 TGS1-201ENST00000260129 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 TP53-218ENST00000610292 2639 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 SDE2-201ENST00000272091 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 AC092135.1-201ENST00000623398 2059 ntBASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 PRR5L-216ENST00000530639 2291 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 AC100774.1-201ENST00000565581 1603 ntBASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 KLHDC4-205ENST00000446344 4444 ntBASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 MOB4-202ENST00000323303 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 RBMY1F-202ENST00000454978 1810 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAF6Q9Y4K3 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAF6Q9Y4K3 MICU1-212ENST00000642044 2221 ntBASIC11.92□□□□□ -0.5
TRAF6Q9Y4K3 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAF6Q9Y4K3 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms