Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 CHI3L2-202ENST00000369748 1468 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ZNF805-202ENST00000414468 1884 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 NTM-206ENST00000427481 2583 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 NTM-221ENST00000539799 2550 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 LST1-201ENST00000211921 504 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 GLULP4-201ENST00000324731 1122 ntBASIC12.12□□□□□ -0.47
NCDNQ9UBB6 DHDDS-203ENST00000374185 1148 ntTSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 HBA2-202ENST00000397806 513 ntTSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ADH5P2-201ENST00000425922 1124 ntBASIC12.12□□□□□ -0.47
NCDNQ9UBB6 DLEC1P1-201ENST00000427139 576 ntBASIC12.12□□□□□ -0.47
NCDNQ9UBB6 PRAMEF32P-201ENST00000431596 1068 ntBASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC079988.1-201ENST00000432984 544 ntTSL 4 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AP001631.1-201ENST00000433840 1052 ntTSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ATP5G1-204ENST00000503641 539 ntTSL 3 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC005355.1-201ENST00000513329 714 ntTSL 3 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 LINC01485-204ENST00000522731 614 ntTSL 4 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AL133372.2-202ENST00000549360 768 ntTSL 3 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AL133299.1-201ENST00000565968 507 ntTSL 3 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC090282.1-202ENST00000575487 515 ntTSL 4 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC061992.1-202ENST00000587575 490 ntTSL 3 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC036214.2-201ENST00000606512 917 ntBASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AL355994.5-201ENST00000613591 236 ntBASIC12.12□□□□□ -0.47
NCDNQ9UBB6 FP236240.2-201ENST00000623896 1052 ntTSL 2 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 AC110048.1-201ENST00000604293 2157 ntBASIC12.12□□□□□ -0.47
NCDNQ9UBB6 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NCDNQ9UBB6 EEF1GP4-201ENST00000467631 1307 ntBASIC12.11□□□□□ -0.47
NCDNQ9UBB6 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 SOHLH2-201ENST00000317764 1909 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 SERPINA1-204ENST00000402629 1450 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 SPANXA2-201ENST00000370518 691 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 SPANXA1-201ENST00000370519 691 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 APOBEC3F-202ENST00000381565 616 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 CCDC148-203ENST00000409889 1160 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NCDNQ9UBB6 SLC25A5P5-201ENST00000435239 897 ntBASIC12.11□□□□□ -0.47
NCDNQ9UBB6 AC023347.1-201ENST00000435352 604 ntTSL 4 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms