Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 CCDC181-201ENST00000367805 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 LRTOMT-205ENST00000423494 1270 ntTSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AL023754.1-201ENST00000424696 863 ntTSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ACTG1P21-201ENST00000431536 1000 ntBASIC12.14□□□□□ -0.47
NCDNQ9UBB6 MTND6P11-201ENST00000431890 483 ntBASIC12.14□□□□□ -0.47
NCDNQ9UBB6 RN7SL398P-201ENST00000470244 298 ntBASIC12.14□□□□□ -0.47
NCDNQ9UBB6 TMED5-204ENST00000479918 1296 ntTSL 3 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 HNRNPA3P13-201ENST00000512222 1122 ntBASIC12.14□□□□□ -0.47
NCDNQ9UBB6 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AC019254.2-201ENST00000560938 556 ntTSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AC104758.4-201ENST00000565869 353 ntTSL 3 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 DSTYK-203ENST00000615388 1042 ntTSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AC242842.1-201ENST00000617712 447 ntTSL 3 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 FAM236C-201ENST00000636267 463 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.14□□□□□ -0.47
NCDNQ9UBB6 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AC005736.1-201ENST00000576810 1394 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 AC091181.1-201ENST00000623762 2098 ntBASIC12.14□□□□□ -0.47
NCDNQ9UBB6 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SMARCE1-203ENST00000377808 1307 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 TSN-202ENST00000409193 1436 ntTSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 AL512383.1-201ENST00000624175 2677 ntBASIC12.13□□□□□ -0.47
NCDNQ9UBB6 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SERF2-202ENST00000339624 506 ntTSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SETDB1-203ENST00000368963 1045 ntTSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 LINC01874-201ENST00000427398 510 ntTSL 2 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 CSMD2-AS1-205ENST00000434181 655 ntTSL 3 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 DEFA8P-201ENST00000457582 285 ntBASIC12.13□□□□□ -0.47
NCDNQ9UBB6 AC068298.1-201ENST00000465165 161 ntBASIC12.13□□□□□ -0.47
NCDNQ9UBB6 DUBR-204ENST00000490441 1149 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 UBE2D3-219ENST00000505207 527 ntTSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SNORA50B-201ENST00000517198 135 ntBASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 AP001972.2-201ENST00000529304 216 ntTSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 MESTP2-201ENST00000559787 889 ntBASIC12.13□□□□□ -0.47
NCDNQ9UBB6 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 AC005387.2-201ENST00000596596 440 ntTSL 3 BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 SNORA50B-202ENST00000630737 137 ntBASIC12.13□□□□□ -0.47
NCDNQ9UBB6 ABHD11-AS1-202ENST00000641969 358 ntBASIC12.13□□□□□ -0.47
NCDNQ9UBB6 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 CTAGE10P-201ENST00000318353 2408 ntBASIC12.13□□□□□ -0.47
NCDNQ9UBB6 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NCDNQ9UBB6 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms