Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MTHFRP42898 PITX2-212ENST00000614423 1866 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
MTHFRP42898 PIK3C3-210ENST00000589056 2074 ntTSL 2 BASIC12.82□□□□□ -0.36
MTHFRP42898 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.82□□□□□ -0.36
MTHFRP42898 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MTHFRP42898 AL596223.1-201ENST00000450995 1933 ntTSL 2 BASIC12.82□□□□□ -0.36
MTHFRP42898 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
MTHFRP42898 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
MTHFRP42898 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.82□□□□□ -0.36
MTHFRP42898 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MTHFRP42898 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MTHFRP42898 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.81□□□□□ -0.36
MTHFRP42898 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 AL109618.1-201ENST00000434910 1683 ntBASIC12.81□□□□□ -0.36
MTHFRP42898 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC12.81□□□□□ -0.36
MTHFRP42898 RCL1-203ENST00000381732 804 ntTSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 KRTAP4-11-201ENST00000391413 1180 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
MTHFRP42898 AL591503.3-201ENST00000423038 635 ntBASIC12.81□□□□□ -0.36
MTHFRP42898 LINC01621-201ENST00000438797 481 ntTSL 5 BASIC12.81□□□□□ -0.36
MTHFRP42898 AP000350.1-201ENST00000443377 532 ntBASIC12.81□□□□□ -0.36
MTHFRP42898 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 AC016924.1-202ENST00000512435 447 ntTSL 3 BASIC12.81□□□□□ -0.36
MTHFRP42898 AP002512.2-201ENST00000532561 623 ntBASIC12.81□□□□□ -0.36
MTHFRP42898 OLR1-211ENST00000545927 1008 ntTSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 AC066612.1-203ENST00000560623 481 ntTSL 4 BASIC12.81□□□□□ -0.36
MTHFRP42898 AC011773.4-202ENST00000566000 1264 ntBASIC12.81□□□□□ -0.36
MTHFRP42898 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC12.81□□□□□ -0.36
MTHFRP42898 AC022296.3-201ENST00000608823 403 ntBASIC12.81□□□□□ -0.36
MTHFRP42898 FAM236A-202ENST00000611003 403 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 AL117190.3-201ENST00000621821 87 ntBASIC12.81□□□□□ -0.36
MTHFRP42898 AC080080.2-201ENST00000624307 590 ntBASIC12.81□□□□□ -0.36
MTHFRP42898 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.81□□□□□ -0.36
MTHFRP42898 ANKRD20A4-201ENST00000357336 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 OR2H2-201ENST00000383640 1514 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
MTHFRP42898 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
MTHFRP42898 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MTHFRP42898 METAP2-209ENST00000550777 1779 ntTSL 5 BASIC12.81□□□□□ -0.36
MTHFRP42898 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 HCK-208ENST00000534862 1581 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 HCK-211ENST00000639405 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
MTHFRP42898 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MTHFRP42898 BTNL8-210ENST00000533815 1600 ntTSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
MTHFRP42898 FHL2-204ENST00000393352 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 MED8-201ENST00000290663 1483 ntTSL 5 BASIC12.8□□□□□ -0.36
MTHFRP42898 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MTHFRP42898 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC12.8□□□□□ -0.36
MTHFRP42898 WDR78-201ENST00000371022 1520 ntTSL 5 BASIC12.8□□□□□ -0.36
MTHFRP42898 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 CD79B-202ENST00000349817 378 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 NANOGNB-201ENST00000382119 907 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC12.8□□□□□ -0.36
MTHFRP42898 AC008073.2-202ENST00000438414 674 ntTSL 3 BASIC12.8□□□□□ -0.36
MTHFRP42898 ATP6AP1L-202ENST00000439350 758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 AC099796.2-201ENST00000444140 108 ntBASIC12.8□□□□□ -0.36
MTHFRP42898 RN7SL728P-201ENST00000464718 300 ntBASIC12.8□□□□□ -0.36
MTHFRP42898 ATP6V0CP1-201ENST00000482495 618 ntBASIC12.8□□□□□ -0.36
MTHFRP42898 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
MTHFRP42898 ZNF970P-201ENST00000547456 223 ntBASIC12.8□□□□□ -0.36
MTHFRP42898 AC091544.2-201ENST00000555864 414 ntTSL 3 BASIC12.8□□□□□ -0.36
MTHFRP42898 PINLYP-203ENST00000562255 569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 TSPAN16-204ENST00000590327 997 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 RN7SL1-201ENST00000618786 299 ntBASIC12.8□□□□□ -0.36
MTHFRP42898 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms