Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC008897.3-201ENST00000607296 483 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AC245369.8-201ENST00000636589 306 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AL391294.1-201ENST00000641352 4068 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 ACSM2B-202ENST00000414188 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 XPNPEP1-203ENST00000369683 2344 ntTSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 KLK7-202ENST00000391807 1912 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 PCYT1A-206ENST00000431016 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 SUCLG2-AS1-202ENST00000482677 2226 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 DGCR11-201ENST00000609958 2214 ntBASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AL358075.4-201ENST00000540385 1553 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 ISG20L2-201ENST00000313146 3303 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 PAX6-258ENST00000639548 1417 ntTSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 ATAT1-201ENST00000318999 2611 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AC018737.2-201ENST00000624478 1512 ntBASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AC027801.1-201ENST00000376609 2100 ntTSL 2 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AL121949.3-201ENST00000406684 385 ntBASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AC093690.1-201ENST00000418963 2110 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AL935212.2-201ENST00000419207 718 ntTSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AL354714.2-201ENST00000425270 1097 ntBASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 MRO-205ENST00000436348 1125 ntTSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 RN7SL33P-201ENST00000462543 342 ntBASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 RN7SL677P-201ENST00000466970 319 ntBASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AC073655.1-201ENST00000550111 493 ntTSL 3 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 TMEM159-204ENST00000572258 584 ntTSL 3 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AC148477.9-201ENST00000623974 539 ntBASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 KRT38-201ENST00000246646 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 CYP3A4-202ENST00000354593 2342 ntTSL 5 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PRICKLE4Q2TBC4 PGAP2-235ENST00000532523 1696 ntTSL 5 BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 SNX16-203ENST00000396330 3452 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 PIGN-214ENST00000589720 1853 ntTSL 2 BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 PSMD1-202ENST00000373635 3230 ntTSL 5 BASIC11.36□□□□□ -0.59
PRICKLE4Q2TBC4 ZP1-201ENST00000278853 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms