Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 SEPT3-202ENST00000396425 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 TIRAP-202ENST00000392679 2195 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SCN2BO60939 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
SCN2BO60939 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SCN2BO60939 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 AC080128.2-201ENST00000641520 11863 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 ARSK-201ENST00000380009 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 EIF2D-202ENST00000367114 1633 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SCN2BO60939 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SCN2BO60939 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
SCN2BO60939 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SCN2BO60939 RAB37-212ENST00000528438 1494 ntTSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 MPI-207ENST00000563422 1481 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 SYNGAP1-207ENST00000628646 4264 ntTSL 5 BASIC11.71□□□□□ -0.53
SCN2BO60939 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 SLC22A8-205ENST00000535878 1387 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 CLN8-212ENST00000637083 2001 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SCN2BO60939 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 FKBP4P1-201ENST00000507284 1347 ntBASIC11.71□□□□□ -0.53
SCN2BO60939 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SCN2BO60939 OR2A9P-202ENST00000479102 1990 ntBASIC11.71□□□□□ -0.53
SCN2BO60939 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 AC130456.2-201ENST00000563613 1937 ntTSL 5 BASIC11.71□□□□□ -0.53
SCN2BO60939 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 CLPSL1-201ENST00000373861 602 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC11.71□□□□□ -0.53
SCN2BO60939 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 AC024293.1-201ENST00000467930 498 ntBASIC11.71□□□□□ -0.53
SCN2BO60939 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC11.71□□□□□ -0.53
SCN2BO60939 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC11.71□□□□□ -0.53
SCN2BO60939 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC11.71□□□□□ -0.53
SCN2BO60939 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC11.71□□□□□ -0.53
SCN2BO60939 IKBKE-202ENST00000579827 678 ntTSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 AP005212.2-201ENST00000584979 510 ntBASIC11.71□□□□□ -0.53
SCN2BO60939 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC11.71□□□□□ -0.53
SCN2BO60939 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 AL117379.1-201ENST00000619319 677 ntBASIC11.71□□□□□ -0.53
SCN2BO60939 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC11.71□□□□□ -0.53
SCN2BO60939 AC127024.7-201ENST00000625101 200 ntBASIC11.71□□□□□ -0.53
SCN2BO60939 SNX1-214ENST00000625244 324 ntTSL 5 BASIC11.71□□□□□ -0.53
SCN2BO60939 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SCN2BO60939 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCN2BO60939 AC005072.1-201ENST00000606640 1779 ntBASIC11.71□□□□□ -0.54
SCN2BO60939 AC007614.5-201ENST00000623424 8892 ntBASIC11.71□□□□□ -0.54
SCN2BO60939 KRT38-201ENST00000246646 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCN2BO60939 AL008628.1-201ENST00000564198 5187 ntBASIC11.71□□□□□ -0.54
SCN2BO60939 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCN2BO60939 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCN2BO60939 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC11.71□□□□□ -0.54
SCN2BO60939 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCN2BO60939 AL606970.1-201ENST00000445442 2559 ntTSL 3 BASIC11.71□□□□□ -0.54
SCN2BO60939 CAMSAP1-201ENST00000312405 6054 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCN2BO60939 DCLK2-202ENST00000302176 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCN2BO60939 LINC01304-201ENST00000425949 1475 ntTSL 5 BASIC11.7□□□□□ -0.54
SCN2BO60939 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC11.7□□□□□ -0.54
SCN2BO60939 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC11.7□□□□□ -0.54
SCN2BO60939 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC11.7□□□□□ -0.54
SCN2BO60939 PAX6-258ENST00000639548 1417 ntTSL 5 BASIC11.7□□□□□ -0.54
SCN2BO60939 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCN2BO60939 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCN2BO60939 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCN2BO60939 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC11.7□□□□□ -0.54
SCN2BO60939 AKT2-201ENST00000311278 1393 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCN2BO60939 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms