Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COMMD3-BMI1R4GMX3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
COMMD3-BMI1R4GMX3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COMMD3-BMI1R4GMX3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
COMMD3-BMI1R4GMX3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.26■□□□□ 0.83
COMMD3-BMI1R4GMX3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD3-BMI1R4GMX3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD3-BMI1R4GMX3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 AC131274.2-201ENST00000580697 1507 ntBASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD3-BMI1R4GMX3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD3-BMI1R4GMX3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 AC004987.1-201ENST00000428627 508 ntBASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 ATP5G2P3-201ENST00000429083 425 ntBASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 LINC01006-201ENST00000333319 2292 ntBASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
COMMD3-BMI1R4GMX3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD3-BMI1R4GMX3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
COMMD3-BMI1R4GMX3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.2■□□□□ 0.82
COMMD3-BMI1R4GMX3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms