Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 MIR3181-201ENST00000578512 73 ntBASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF11Q9Y3C5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF11Q9Y3C5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 MIR4466-201ENST00000606121 54 ntBASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF11Q9Y3C5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF11Q9Y3C5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF11Q9Y3C5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF11Q9Y3C5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF11Q9Y3C5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF11Q9Y3C5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF11Q9Y3C5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.08■□□□□ 0.97
RNF11Q9Y3C5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF11Q9Y3C5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF11Q9Y3C5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF11Q9Y3C5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF11Q9Y3C5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 AL031602.1-201ENST00000633169 911 ntBASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF11Q9Y3C5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF11Q9Y3C5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF11Q9Y3C5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms