Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
TFCP2L1Q9NZI6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.78■■■□□ 2.04
TFCP2L1Q9NZI6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 GCSHP5-201ENST00000443090 522 ntBASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TFCP2L1Q9NZI6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 AP003733.4-201ENST00000623785 1697 ntBASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 AL596275.1-201ENST00000423464 877 ntBASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 RARRES2P4-201ENST00000514074 484 ntBASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 MKRN4P-201ENST00000444706 1521 ntBASIC27.76■■■□□ 2.03
TFCP2L1Q9NZI6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.75■■■□□ 2.03
TFCP2L1Q9NZI6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TFCP2L1Q9NZI6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TFCP2L1Q9NZI6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
TFCP2L1Q9NZI6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 ESRRAP1-201ENST00000400596 1257 ntBASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 AL158047.1-201ENST00000445918 881 ntBASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 RPS2P4-201ENST00000476944 856 ntBASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 AC013268.1-206ENST00000638368 961 ntBASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 AC112229.1-201ENST00000639295 961 ntBASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.71■■■□□ 2.03
TFCP2L1Q9NZI6 AC079630.1-202ENST00000618127 1840 ntBASIC27.7■■■□□ 2.02
TFCP2L1Q9NZI6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TFCP2L1Q9NZI6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms