Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 TSPY26P-201ENST00000476365 1326 ntBASIC18.62■□□□□ 0.57
TREM2Q9NZC2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREM2Q9NZC2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 AC242852.2-201ENST00000615738 1807 ntBASIC18.61■□□□□ 0.57
TREM2Q9NZC2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TREM2Q9NZC2 LINC00526-201ENST00000581067 1875 ntBASIC18.6■□□□□ 0.57
TREM2Q9NZC2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 OR2I1P-207ENST00000453522 948 ntBASIC18.6■□□□□ 0.57
TREM2Q9NZC2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 AC092666.2-201ENST00000613287 246 ntBASIC18.6■□□□□ 0.57
TREM2Q9NZC2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TREM2Q9NZC2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TREM2Q9NZC2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TREM2Q9NZC2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TREM2Q9NZC2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TREM2Q9NZC2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 MIR6821-201ENST00000617625 74 ntBASIC18.58■□□□□ 0.56
TREM2Q9NZC2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms