Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.08■□□□□ 0.32
SMCO4Q9NRQ5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMCO4Q9NRQ5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.08■□□□□ 0.32
SMCO4Q9NRQ5 FEM1AP4-201ENST00000443167 1987 ntBASIC17.08■□□□□ 0.32
SMCO4Q9NRQ5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMCO4Q9NRQ5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.07■□□□□ 0.32
SMCO4Q9NRQ5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMCO4Q9NRQ5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMCO4Q9NRQ5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMCO4Q9NRQ5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SMCO4Q9NRQ5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMCO4Q9NRQ5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SMCO4Q9NRQ5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMCO4Q9NRQ5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMCO4Q9NRQ5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 AC018445.3-201ENST00000624177 1945 ntBASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 BX323043.1-201ENST00000641006 1765 ntBASIC17.05■□□□□ 0.32
SMCO4Q9NRQ5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMCO4Q9NRQ5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 Z98882.1-201ENST00000622160 2253 ntBASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.03■□□□□ 0.32
SMCO4Q9NRQ5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 AC108673.1-201ENST00000510422 1159 ntBASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 SETD8P1-201ENST00000623146 1180 ntBASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 AFG3L1P-217ENST00000557444 2447 ntBASIC17.02■□□□□ 0.32
SMCO4Q9NRQ5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMCO4Q9NRQ5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms