Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE5Q9HCH3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE5Q9HCH3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE5Q9HCH3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 CD99P1-205ENST00000527459 561 ntBASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE5Q9HCH3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 C9orf163-202ENST00000624034 2573 ntBASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 OR2I1P-207ENST00000453522 948 ntBASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE5Q9HCH3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 NCF1B-203ENST00000435988 1254 ntBASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 TSPY20P-201ENST00000450910 630 ntBASIC20.83■□□□□ 0.93
CPNE5Q9HCH3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPNE5Q9HCH3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.83■□□□□ 0.92
CPNE5Q9HCH3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE5Q9HCH3 AP004607.4-201ENST00000530158 1459 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms