Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 ATP5G2P3-201ENST00000429083 425 ntBASIC20■□□□□ 0.79
ZNF556Q9HAH1 DUX4L4-201ENST00000566884 1269 ntBASIC20■□□□□ 0.79
ZNF556Q9HAH1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 AC004987.1-201ENST00000428627 508 ntBASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 AC005229.4-201ENST00000610085 2198 ntBASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 MIR4508-201ENST00000584178 70 ntBASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 CA15P2-201ENST00000611168 834 ntBASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms