Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF556Q9HAH1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 ATP5G2P3-201ENST00000429083 425 ntBASIC20■□□□□ 0.79
ZNF556Q9HAH1 DUX4L4-201ENST00000566884 1269 ntBASIC20■□□□□ 0.79
ZNF556Q9HAH1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20■□□□□ 0.79
ZNF556Q9HAH1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF556Q9HAH1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF556Q9HAH1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 AC004987.1-201ENST00000428627 508 ntBASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF556Q9HAH1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 AC005229.4-201ENST00000610085 2198 ntBASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF556Q9HAH1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 MIR4508-201ENST00000584178 70 ntBASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ZNF556Q9HAH1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 CA15P2-201ENST00000611168 834 ntBASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF556Q9HAH1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms