Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALX4Q9H161 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.27■□□□□ 0.52
ALX4Q9H161 AL031848.2-201ENST00000607670 837 ntBASIC18.27■□□□□ 0.52
ALX4Q9H161 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ALX4Q9H161 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALX4Q9H161 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALX4Q9H161 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALX4Q9H161 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.51
ALX4Q9H161 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.26■□□□□ 0.51
ALX4Q9H161 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.26■□□□□ 0.51
ALX4Q9H161 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.26■□□□□ 0.51
ALX4Q9H161 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.26■□□□□ 0.51
ALX4Q9H161 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
ALX4Q9H161 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALX4Q9H161 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.25■□□□□ 0.51
ALX4Q9H161 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ALX4Q9H161 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.25■□□□□ 0.51
ALX4Q9H161 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.25■□□□□ 0.51
ALX4Q9H161 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
ALX4Q9H161 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ALX4Q9H161 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
ALX4Q9H161 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALX4Q9H161 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ALX4Q9H161 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.24■□□□□ 0.51
ALX4Q9H161 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ALX4Q9H161 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALX4Q9H161 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.24■□□□□ 0.51
ALX4Q9H161 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALX4Q9H161 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALX4Q9H161 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.24■□□□□ 0.51
ALX4Q9H161 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALX4Q9H161 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALX4Q9H161 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.23■□□□□ 0.51
ALX4Q9H161 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALX4Q9H161 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALX4Q9H161 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.23■□□□□ 0.51
ALX4Q9H161 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALX4Q9H161 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALX4Q9H161 AC022616.5-201ENST00000518796 181 ntBASIC18.23■□□□□ 0.51
ALX4Q9H161 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.23■□□□□ 0.51
ALX4Q9H161 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALX4Q9H161 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
ALX4Q9H161 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALX4Q9H161 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.23■□□□□ 0.51
ALX4Q9H161 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ALX4Q9H161 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ALX4Q9H161 AC009299.2-201ENST00000482477 511 ntBASIC18.22■□□□□ 0.51
ALX4Q9H161 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ALX4Q9H161 AC120024.1-201ENST00000562672 995 ntBASIC18.22■□□□□ 0.51
ALX4Q9H161 THA1P-201ENST00000590384 1145 ntBASIC18.22■□□□□ 0.51
ALX4Q9H161 AL035685.1-201ENST00000636663 812 ntBASIC18.22■□□□□ 0.51
ALX4Q9H161 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ALX4Q9H161 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.22■□□□□ 0.51
ALX4Q9H161 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.22■□□□□ 0.51
ALX4Q9H161 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALX4Q9H161 LINC01960-201ENST00000563759 1884 ntBASIC18.22■□□□□ 0.51
ALX4Q9H161 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ALX4Q9H161 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ALX4Q9H161 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALX4Q9H161 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALX4Q9H161 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.21■□□□□ 0.51
ALX4Q9H161 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.21■□□□□ 0.51
ALX4Q9H161 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.21■□□□□ 0.51
ALX4Q9H161 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.21■□□□□ 0.51
ALX4Q9H161 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
ALX4Q9H161 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALX4Q9H161 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.21■□□□□ 0.51
ALX4Q9H161 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.21■□□□□ 0.51
ALX4Q9H161 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ALX4Q9H161 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.5
ALX4Q9H161 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALX4Q9H161 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALX4Q9H161 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ALX4Q9H161 AF106564.1-201ENST00000607058 2553 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms