Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
STRADBQ9C0K7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 AL121832.2-201ENST00000610979 668 ntBASIC20.69■□□□□ 0.9
STRADBQ9C0K7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
STRADBQ9C0K7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 AC007322.1-201ENST00000426983 750 ntBASIC20.68■□□□□ 0.9
STRADBQ9C0K7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.68■□□□□ 0.9
STRADBQ9C0K7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
STRADBQ9C0K7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
STRADBQ9C0K7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 AP001160.3-201ENST00000601484 763 ntBASIC20.65■□□□□ 0.9
STRADBQ9C0K7 UBE2DNL-204ENST00000602536 740 ntBASIC20.65■□□□□ 0.9
STRADBQ9C0K7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.65■□□□□ 0.9
STRADBQ9C0K7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.64■□□□□ 0.9
STRADBQ9C0K7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
STRADBQ9C0K7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
STRADBQ9C0K7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 AC083906.2-201ENST00000511578 360 ntBASIC20.64■□□□□ 0.89
STRADBQ9C0K7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 AC005181.1-201ENST00000604782 1256 ntBASIC20.64■□□□□ 0.89
STRADBQ9C0K7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
STRADBQ9C0K7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STRADBQ9C0K7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STRADBQ9C0K7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STRADBQ9C0K7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STRADBQ9C0K7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
STRADBQ9C0K7 ABHD17AP1-201ENST00000358206 933 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms