Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 AC009086.3-201ENST00000623486 1008 ntBASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRDL1Q9BU40 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHRDL1Q9BU40 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRDL1Q9BU40 AC004687.1-201ENST00000579003 1625 ntBASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHRDL1Q9BU40 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRDL1Q9BU40 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CHRDL1Q9BU40 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRDL1Q9BU40 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CHRDL1Q9BU40 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CHRDL1Q9BU40 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRDL1Q9BU40 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRDL1Q9BU40 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRDL1Q9BU40 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.08■□□□□ 0.32
CHRDL1Q9BU40 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRDL1Q9BU40 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRDL1Q9BU40 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRDL1Q9BU40 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRDL1Q9BU40 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 AC087742.1-201ENST00000575880 1738 ntBASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms