Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.01■□□□□ 0.63
VRK1Q99986 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK1Q99986 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.01■□□□□ 0.63
VRK1Q99986 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VRK1Q99986 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK1Q99986 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK1Q99986 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK1Q99986 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VRK1Q99986 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK1Q99986 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VRK1Q99986 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VRK1Q99986 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19■□□□□ 0.63
VRK1Q99986 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK1Q99986 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19■□□□□ 0.63
VRK1Q99986 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19■□□□□ 0.63
VRK1Q99986 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19■□□□□ 0.63
VRK1Q99986 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19■□□□□ 0.63
VRK1Q99986 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19■□□□□ 0.63
VRK1Q99986 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VRK1Q99986 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK1Q99986 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VRK1Q99986 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VRK1Q99986 ECEL1P1-201ENST00000373592 1742 ntBASIC19■□□□□ 0.63
VRK1Q99986 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK1Q99986 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK1Q99986 FP325331.1-202ENST00000623531 1380 ntBASIC18.99■□□□□ 0.63
VRK1Q99986 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK1Q99986 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK1Q99986 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VRK1Q99986 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK1Q99986 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK1Q99986 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VRK1Q99986 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
VRK1Q99986 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK1Q99986 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VRK1Q99986 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VRK1Q99986 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 IRS3P-201ENST00000223076 1006 ntBASIC18.98■□□□□ 0.63
VRK1Q99986 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VRK1Q99986 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.98■□□□□ 0.63
VRK1Q99986 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VRK1Q99986 AC133637.1-201ENST00000624115 1537 ntBASIC18.98■□□□□ 0.63
VRK1Q99986 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.98■□□□□ 0.63
VRK1Q99986 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK1Q99986 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VRK1Q99986 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VRK1Q99986 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 LINC01529-204ENST00000636474 1715 ntBASIC18.97■□□□□ 0.63
VRK1Q99986 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 AC144652.1-201ENST00000609974 1624 ntBASIC18.97■□□□□ 0.63
VRK1Q99986 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.97■□□□□ 0.63
VRK1Q99986 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.97■□□□□ 0.63
VRK1Q99986 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.97■□□□□ 0.63
VRK1Q99986 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.97■□□□□ 0.63
VRK1Q99986 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 AL137060.1-201ENST00000618151 2648 ntBASIC18.97■□□□□ 0.63
VRK1Q99986 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VRK1Q99986 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
VRK1Q99986 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.96■□□□□ 0.63
VRK1Q99986 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK1Q99986 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.96■□□□□ 0.63
VRK1Q99986 ANOS2P-203ENST00000472227 1816 ntBASIC18.96■□□□□ 0.63
VRK1Q99986 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK1Q99986 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.96■□□□□ 0.63
VRK1Q99986 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK1Q99986 SLC47A1P1-202ENST00000449666 945 ntBASIC18.96■□□□□ 0.63
VRK1Q99986 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VRK1Q99986 AC092068.2-201ENST00000590491 1708 ntBASIC18.96■□□□□ 0.63
VRK1Q99986 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK1Q99986 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK1Q99986 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.95■□□□□ 0.62
VRK1Q99986 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
VRK1Q99986 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.95■□□□□ 0.62
VRK1Q99986 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VRK1Q99986 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.95■□□□□ 0.62
VRK1Q99986 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 DUSP8P3-201ENST00000399571 1760 ntBASIC18.95■□□□□ 0.62
VRK1Q99986 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms