Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS1Q99742 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NPAS1Q99742 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
NPAS1Q99742 ZNRF2P3-201ENST00000424200 374 ntBASIC19.75■□□□□ 0.75
NPAS1Q99742 IGHV3-19-201ENST00000521488 291 ntBASIC19.75■□□□□ 0.75
NPAS1Q99742 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.75■□□□□ 0.75
NPAS1Q99742 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS1Q99742 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS1Q99742 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.75■□□□□ 0.75
NPAS1Q99742 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
NPAS1Q99742 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.74■□□□□ 0.75
NPAS1Q99742 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.74■□□□□ 0.75
NPAS1Q99742 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.74■□□□□ 0.75
NPAS1Q99742 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NPAS1Q99742 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NPAS1Q99742 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NPAS1Q99742 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS1Q99742 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
NPAS1Q99742 AC127496.7-201ENST00000625110 1798 ntBASIC19.73■□□□□ 0.75
NPAS1Q99742 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS1Q99742 AC010141.3-201ENST00000456659 717 ntBASIC19.73■□□□□ 0.75
NPAS1Q99742 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS1Q99742 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.73■□□□□ 0.75
NPAS1Q99742 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS1Q99742 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS1Q99742 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 ESRRAP2-201ENST00000418437 1549 ntBASIC19.72■□□□□ 0.75
NPAS1Q99742 GUSBP5-202ENST00000510805 1989 ntBASIC19.72■□□□□ 0.75
NPAS1Q99742 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NPAS1Q99742 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS1Q99742 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NPAS1Q99742 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS1Q99742 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NPAS1Q99742 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NPAS1Q99742 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
NPAS1Q99742 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.71■□□□□ 0.75
NPAS1Q99742 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.71■□□□□ 0.75
NPAS1Q99742 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.71■□□□□ 0.75
NPAS1Q99742 AC068587.7-201ENST00000641602 218 ntBASIC19.71■□□□□ 0.75
NPAS1Q99742 AC139530.1-201ENST00000575312 1977 ntBASIC19.71■□□□□ 0.75
NPAS1Q99742 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NPAS1Q99742 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.71■□□□□ 0.75
NPAS1Q99742 LINC00526-201ENST00000581067 1875 ntBASIC19.71■□□□□ 0.75
NPAS1Q99742 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS1Q99742 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.71■□□□□ 0.74
NPAS1Q99742 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.7■□□□□ 0.74
NPAS1Q99742 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.7■□□□□ 0.74
NPAS1Q99742 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.7■□□□□ 0.74
NPAS1Q99742 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NPAS1Q99742 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.7■□□□□ 0.74
NPAS1Q99742 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.7■□□□□ 0.74
NPAS1Q99742 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 AC019069.1-201ENST00000610008 1333 ntBASIC19.7■□□□□ 0.74
NPAS1Q99742 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS1Q99742 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
NPAS1Q99742 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS1Q99742 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS1Q99742 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS1Q99742 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NPAS1Q99742 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NPAS1Q99742 EP400NL-214ENST00000641289 2402 ntBASIC19.69■□□□□ 0.74
NPAS1Q99742 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS1Q99742 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS1Q99742 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms