Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NDNQ99608 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NDNQ99608 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NDNQ99608 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NDNQ99608 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NDNQ99608 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.67■■□□□ 1.06
NDNQ99608 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NDNQ99608 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NDNQ99608 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.67■■□□□ 1.06
NDNQ99608 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.67■■□□□ 1.06
NDNQ99608 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.67■■□□□ 1.06
NDNQ99608 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.67■■□□□ 1.06
NDNQ99608 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.67■■□□□ 1.06
NDNQ99608 MIR4466-201ENST00000606121 54 ntBASIC21.67■■□□□ 1.06
NDNQ99608 CA15P2-201ENST00000611168 834 ntBASIC21.67■■□□□ 1.06
NDNQ99608 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NDNQ99608 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.67■■□□□ 1.06
NDNQ99608 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.67■■□□□ 1.06
NDNQ99608 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NDNQ99608 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NDNQ99608 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NDNQ99608 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDNQ99608 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.66■■□□□ 1.06
NDNQ99608 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDNQ99608 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDNQ99608 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NDNQ99608 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.66■■□□□ 1.06
NDNQ99608 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NDNQ99608 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.66■■□□□ 1.06
NDNQ99608 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.66■■□□□ 1.06
NDNQ99608 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.66■■□□□ 1.06
NDNQ99608 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDNQ99608 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDNQ99608 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NDNQ99608 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDNQ99608 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.65■■□□□ 1.06
NDNQ99608 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.65■■□□□ 1.06
NDNQ99608 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NDNQ99608 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NDNQ99608 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDNQ99608 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NDNQ99608 FBXW4P1-201ENST00000426721 2239 ntBASIC21.64■■□□□ 1.06
NDNQ99608 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NDNQ99608 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.64■■□□□ 1.06
NDNQ99608 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NDNQ99608 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NDNQ99608 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NDNQ99608 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NDNQ99608 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NDNQ99608 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NDNQ99608 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NDNQ99608 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.64■■□□□ 1.05
NDNQ99608 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NDNQ99608 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
NDNQ99608 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.64■■□□□ 1.05
NDNQ99608 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.63■■□□□ 1.05
NDNQ99608 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.63■■□□□ 1.05
NDNQ99608 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NDNQ99608 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
NDNQ99608 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.63■■□□□ 1.05
NDNQ99608 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.63■■□□□ 1.05
NDNQ99608 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.63■■□□□ 1.05
NDNQ99608 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.63■■□□□ 1.05
NDNQ99608 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NDNQ99608 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.62■■□□□ 1.05
NDNQ99608 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NDNQ99608 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NDNQ99608 AC131281.2-201ENST00000520478 145 ntBASIC21.62■■□□□ 1.05
NDNQ99608 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NDNQ99608 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.62■■□□□ 1.05
NDNQ99608 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NDNQ99608 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NDNQ99608 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NDNQ99608 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.61■■□□□ 1.05
NDNQ99608 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NDNQ99608 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.61■■□□□ 1.05
NDNQ99608 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.61■■□□□ 1.05
NDNQ99608 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.61■■□□□ 1.05
NDNQ99608 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.61■■□□□ 1.05
NDNQ99608 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.61■■□□□ 1.05
NDNQ99608 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.61■■□□□ 1.05
NDNQ99608 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms