Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 UBE2DNL-204ENST00000602536 740 ntBASIC22.13■■□□□ 1.13
NELL2Q99435 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.13■■□□□ 1.13
NELL2Q99435 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NELL2Q99435 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NELL2Q99435 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.12■■□□□ 1.13
NELL2Q99435 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NELL2Q99435 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NELL2Q99435 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
NELL2Q99435 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NELL2Q99435 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.12■■□□□ 1.13
NELL2Q99435 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NELL2Q99435 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NELL2Q99435 AC133552.2-202ENST00000575694 574 ntBASIC22.12■■□□□ 1.13
NELL2Q99435 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
NELL2Q99435 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
NELL2Q99435 MYCNOS-205ENST00000641950 531 ntBASIC22.12■■□□□ 1.13
NELL2Q99435 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NELL2Q99435 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NELL2Q99435 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
NELL2Q99435 AC079630.1-202ENST00000618127 1840 ntBASIC22.12■■□□□ 1.13
NELL2Q99435 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NELL2Q99435 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.11■■□□□ 1.13
NELL2Q99435 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NELL2Q99435 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NELL2Q99435 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.11■■□□□ 1.13
NELL2Q99435 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.11■■□□□ 1.13
NELL2Q99435 AP001160.3-201ENST00000601484 763 ntBASIC22.11■■□□□ 1.13
NELL2Q99435 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.11■■□□□ 1.13
NELL2Q99435 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NELL2Q99435 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NELL2Q99435 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NELL2Q99435 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NELL2Q99435 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NELL2Q99435 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.1■■□□□ 1.13
NELL2Q99435 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.1■■□□□ 1.13
NELL2Q99435 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.1■■□□□ 1.13
NELL2Q99435 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
NELL2Q99435 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.1■■□□□ 1.13
NELL2Q99435 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NELL2Q99435 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
NELL2Q99435 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NELL2Q99435 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NELL2Q99435 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NELL2Q99435 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NELL2Q99435 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.09■■□□□ 1.13
NELL2Q99435 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.09■■□□□ 1.13
NELL2Q99435 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.09■■□□□ 1.13
NELL2Q99435 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.09■■□□□ 1.13
NELL2Q99435 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NELL2Q99435 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NELL2Q99435 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
NELL2Q99435 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
NELL2Q99435 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NELL2Q99435 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.08■■□□□ 1.13
NELL2Q99435 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NELL2Q99435 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.08■■□□□ 1.13
NELL2Q99435 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
NELL2Q99435 KRT18P20-201ENST00000548986 1279 ntBASIC22.08■■□□□ 1.13
NELL2Q99435 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.08■■□□□ 1.13
NELL2Q99435 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.08■■□□□ 1.13
NELL2Q99435 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NELL2Q99435 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.08■■□□□ 1.12
NELL2Q99435 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
NELL2Q99435 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
NELL2Q99435 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
NELL2Q99435 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
NELL2Q99435 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.07■■□□□ 1.12
NELL2Q99435 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.07■■□□□ 1.12
NELL2Q99435 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
NELL2Q99435 MIR4651-201ENST00000582622 73 ntBASIC22.07■■□□□ 1.12
NELL2Q99435 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
NELL2Q99435 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NELL2Q99435 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NELL2Q99435 AL353803.4-201ENST00000565882 1934 ntBASIC22.07■■□□□ 1.12
NELL2Q99435 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NELL2Q99435 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
NELL2Q99435 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.06■■□□□ 1.12
NELL2Q99435 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.06■■□□□ 1.12
NELL2Q99435 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NELL2Q99435 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NELL2Q99435 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NELL2Q99435 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
NELL2Q99435 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.06■■□□□ 1.12
NELL2Q99435 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NELL2Q99435 AC105036.2-201ENST00000569468 176 ntBASIC22.06■■□□□ 1.12
NELL2Q99435 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NELL2Q99435 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.06■■□□□ 1.12
NELL2Q99435 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NELL2Q99435 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NELL2Q99435 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
NELL2Q99435 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
NELL2Q99435 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NELL2Q99435 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
NELL2Q99435 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.05■■□□□ 1.12
NELL2Q99435 MIR4758-201ENST00000577688 71 ntBASIC22.05■■□□□ 1.12
NELL2Q99435 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NELL2Q99435 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
NELL2Q99435 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NELL2Q99435 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NELL2Q99435 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms