Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
CMTM3Q96MX0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMTM3Q96MX0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CMTM3Q96MX0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.65■□□□□ 0.58
CMTM3Q96MX0 OXCT2P1-201ENST00000447263 1535 ntBASIC18.64■□□□□ 0.58
CMTM3Q96MX0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CMTM3Q96MX0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CMTM3Q96MX0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CMTM3Q96MX0 THA1P-201ENST00000590384 1145 ntBASIC18.64■□□□□ 0.57
CMTM3Q96MX0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CMTM3Q96MX0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CMTM3Q96MX0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.64■□□□□ 0.57
CMTM3Q96MX0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CMTM3Q96MX0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 RNF126P1-201ENST00000567452 1320 ntBASIC18.63■□□□□ 0.57
CMTM3Q96MX0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMTM3Q96MX0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CMTM3Q96MX0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 AC104564.3-201ENST00000582367 638 ntBASIC18.61■□□□□ 0.57
CMTM3Q96MX0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CMTM3Q96MX0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMTM3Q96MX0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CMTM3Q96MX0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms