Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
NBPF4Q96M43 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.83■■■□□ 2.21
NBPF4Q96M43 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.83■■■□□ 2.21
NBPF4Q96M43 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.83■■■□□ 2.21
NBPF4Q96M43 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC28.83■■■□□ 2.21
NBPF4Q96M43 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.83■■■□□ 2.21
NBPF4Q96M43 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
NBPF4Q96M43 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.82■■■□□ 2.2
NBPF4Q96M43 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
NBPF4Q96M43 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC28.82■■■□□ 2.2
NBPF4Q96M43 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
NBPF4Q96M43 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
NBPF4Q96M43 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NBPF4Q96M43 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NBPF4Q96M43 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
NBPF4Q96M43 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
NBPF4Q96M43 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
NBPF4Q96M43 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
NBPF4Q96M43 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NBPF4Q96M43 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 AC055733.4-201ENST00000638462 1354 ntBASIC28.81■■■□□ 2.2
NBPF4Q96M43 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
NBPF4Q96M43 DUX4L16-201ENST00000555130 1264 ntBASIC28.81■■■□□ 2.2
NBPF4Q96M43 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 MAZ-216ENST00000616501 991 ntTSL 5 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 MDK-213ENST00000617138 635 ntTSL 2 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.81■■■□□ 2.2
NBPF4Q96M43 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NBPF4Q96M43 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
NBPF4Q96M43 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NBPF4Q96M43 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
NBPF4Q96M43 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NBPF4Q96M43 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NBPF4Q96M43 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC28.8■■■□□ 2.2
NBPF4Q96M43 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
NBPF4Q96M43 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NBPF4Q96M43 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.8■■■□□ 2.2
NBPF4Q96M43 UBE2DNL-204ENST00000602536 740 ntBASIC28.8■■■□□ 2.2
NBPF4Q96M43 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NBPF4Q96M43 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC28.79■■■□□ 2.2
NBPF4Q96M43 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
NBPF4Q96M43 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.79■■■□□ 2.2
NBPF4Q96M43 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
NBPF4Q96M43 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NBPF4Q96M43 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
NBPF4Q96M43 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NBPF4Q96M43 GPX1P1-201ENST00000388829 606 ntBASIC28.78■■■□□ 2.2
NBPF4Q96M43 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.78■■■□□ 2.2
NBPF4Q96M43 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC28.78■■■□□ 2.2
NBPF4Q96M43 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.78■■■□□ 2.2
NBPF4Q96M43 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
NBPF4Q96M43 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
NBPF4Q96M43 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC28.78■■■□□ 2.2
NBPF4Q96M43 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC28.78■■■□□ 2.2
NBPF4Q96M43 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NBPF4Q96M43 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
NBPF4Q96M43 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NBPF4Q96M43 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.77■■■□□ 2.2
NBPF4Q96M43 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NBPF4Q96M43 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NBPF4Q96M43 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NBPF4Q96M43 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NBPF4Q96M43 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NBPF4Q96M43 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
NBPF4Q96M43 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
NBPF4Q96M43 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NBPF4Q96M43 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.76■■■□□ 2.2
NBPF4Q96M43 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
NBPF4Q96M43 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.76■■■□□ 2.19
NBPF4Q96M43 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.76■■■□□ 2.19
NBPF4Q96M43 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
NBPF4Q96M43 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
NBPF4Q96M43 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC28.75■■■□□ 2.19
NBPF4Q96M43 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
NBPF4Q96M43 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
NBPF4Q96M43 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
NBPF4Q96M43 ABHD17AP1-201ENST00000358206 933 ntBASIC28.75■■■□□ 2.19
NBPF4Q96M43 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
NBPF4Q96M43 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.75■■■□□ 2.19
NBPF4Q96M43 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.75■■■□□ 2.19
NBPF4Q96M43 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.75■■■□□ 2.19
NBPF4Q96M43 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
NBPF4Q96M43 MFF-207ENST00000409565 1548 ntTSL 2 BASIC28.74■■■□□ 2.19
NBPF4Q96M43 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
NBPF4Q96M43 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.74■■■□□ 2.19
NBPF4Q96M43 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
NBPF4Q96M43 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.74■■■□□ 2.19
NBPF4Q96M43 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
NBPF4Q96M43 AC079089.2-201ENST00000531211 1277 ntBASIC28.74■■■□□ 2.19
NBPF4Q96M43 AP001160.3-201ENST00000601484 763 ntBASIC28.74■■■□□ 2.19
NBPF4Q96M43 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.74■■■□□ 2.19
NBPF4Q96M43 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
NBPF4Q96M43 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.74■■■□□ 2.19
NBPF4Q96M43 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.73■■■□□ 2.19
NBPF4Q96M43 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
NBPF4Q96M43 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms