Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 SLC25A24-204ENST00000569674 2357 ntBASIC18.8■□□□□ 0.6
SEH1LQ96EE3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 AC131281.2-201ENST00000520478 145 ntBASIC18.8■□□□□ 0.6
SEH1LQ96EE3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 FAM99A-202ENST00000538190 1989 ntBASIC18.79■□□□□ 0.6
SEH1LQ96EE3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEH1LQ96EE3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEH1LQ96EE3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 AC010542.4-201ENST00000563151 1910 ntBASIC18.77■□□□□ 0.6
SEH1LQ96EE3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.77■□□□□ 0.6
SEH1LQ96EE3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.77■□□□□ 0.6
SEH1LQ96EE3 LINC01529-204ENST00000636474 1715 ntBASIC18.77■□□□□ 0.59
SEH1LQ96EE3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SEH1LQ96EE3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SEH1LQ96EE3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 AC006455.2-201ENST00000429931 906 ntBASIC18.75■□□□□ 0.59
SEH1LQ96EE3 AC099791.2-201ENST00000605725 427 ntBASIC18.75■□□□□ 0.59
SEH1LQ96EE3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SEH1LQ96EE3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.74■□□□□ 0.59
SEH1LQ96EE3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms