Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.84■□□□□ 0.93
UBE2E3Q969T4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 AC096631.2-201ENST00000436136 790 ntBASIC20.84■□□□□ 0.93
UBE2E3Q969T4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 OR7E47P-201ENST00000546390 1422 ntBASIC20.84■□□□□ 0.93
UBE2E3Q969T4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
UBE2E3Q969T4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 AC233992.3-201ENST00000607491 485 ntBASIC20.83■□□□□ 0.93
UBE2E3Q969T4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE2E3Q969T4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2E3Q969T4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2E3Q969T4 C11orf96-202ENST00000528572 1834 ntBASIC20.83■□□□□ 0.92
UBE2E3Q969T4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2E3Q969T4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2E3Q969T4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 PBX2P1-201ENST00000493219 1291 ntBASIC20.81■□□□□ 0.92
UBE2E3Q969T4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2E3Q969T4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 AC106739.1-201ENST00000617035 715 ntBASIC20.8■□□□□ 0.92
UBE2E3Q969T4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.8■□□□□ 0.92
UBE2E3Q969T4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2E3Q969T4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2E3Q969T4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UBE2E3Q969T4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.79■□□□□ 0.92
UBE2E3Q969T4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UBE2E3Q969T4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms