Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
TMEM54Q969K7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TMEM54Q969K7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 MIR939-201ENST00000401314 82 ntBASIC19.16■□□□□ 0.66
TMEM54Q969K7 IGHV3-19-201ENST00000521488 291 ntBASIC19.16■□□□□ 0.66
TMEM54Q969K7 AF213884.3-201ENST00000563833 479 ntBASIC19.16■□□□□ 0.66
TMEM54Q969K7 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.16■□□□□ 0.66
TMEM54Q969K7 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM54Q969K7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 AL136967.2-201ENST00000623968 743 ntBASIC19.15■□□□□ 0.66
TMEM54Q969K7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM54Q969K7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM54Q969K7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM54Q969K7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM54Q969K7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM54Q969K7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM54Q969K7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.14■□□□□ 0.66
TMEM54Q969K7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM54Q969K7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM54Q969K7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM54Q969K7 C11orf96-202ENST00000528572 1834 ntBASIC19.14■□□□□ 0.65
TMEM54Q969K7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TMEM54Q969K7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM54Q969K7 SUDS3P1-201ENST00000505831 966 ntBASIC19.14■□□□□ 0.65
TMEM54Q969K7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM54Q969K7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM54Q969K7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM54Q969K7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TMEM54Q969K7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM54Q969K7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM54Q969K7 RASA4CP-201ENST00000424092 1398 ntBASIC19.14■□□□□ 0.65
TMEM54Q969K7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM54Q969K7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM54Q969K7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM54Q969K7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TMEM54Q969K7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TMEM54Q969K7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.13■□□□□ 0.65
TMEM54Q969K7 AC091305.1-201ENST00000479476 895 ntBASIC19.13■□□□□ 0.65
TMEM54Q969K7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.13■□□□□ 0.65
TMEM54Q969K7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM54Q969K7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM54Q969K7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM54Q969K7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TMEM54Q969K7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TMEM54Q969K7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM54Q969K7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM54Q969K7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.12■□□□□ 0.65
TMEM54Q969K7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM54Q969K7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.12■□□□□ 0.65
TMEM54Q969K7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM54Q969K7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM54Q969K7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM54Q969K7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM54Q969K7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM54Q969K7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM54Q969K7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM54Q969K7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM54Q969K7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM54Q969K7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM54Q969K7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM54Q969K7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.11■□□□□ 0.65
TMEM54Q969K7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.11■□□□□ 0.65
TMEM54Q969K7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TMEM54Q969K7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM54Q969K7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM54Q969K7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM54Q969K7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM54Q969K7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TMEM54Q969K7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM54Q969K7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM54Q969K7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
TMEM54Q969K7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TMEM54Q969K7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM54Q969K7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms