Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
TRUB1Q8WWH5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRUB1Q8WWH5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRUB1Q8WWH5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
TRUB1Q8WWH5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.83■□□□□ 0.76
TRUB1Q8WWH5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRUB1Q8WWH5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRUB1Q8WWH5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 RARRES2P2-201ENST00000394842 485 ntBASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 AC074183.2-201ENST00000623112 922 ntBASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB1Q8WWH5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRUB1Q8WWH5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 AC009086.3-201ENST00000623486 1008 ntBASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB1Q8WWH5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRUB1Q8WWH5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRUB1Q8WWH5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 SNX5-217ENST00000606557 1087 ntBASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 CA15P2-201ENST00000611168 834 ntBASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRUB1Q8WWH5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRUB1Q8WWH5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRUB1Q8WWH5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRUB1Q8WWH5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms