Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 ANOS2P-203ENST00000472227 1816 ntBASIC18.85■□□□□ 0.61
LINC01560Q8TB33 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINC01560Q8TB33 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 KRT87P-202ENST00000534226 1464 ntBASIC18.84■□□□□ 0.61
LINC01560Q8TB33 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC01560Q8TB33 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.83■□□□□ 0.61
LINC01560Q8TB33 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01560Q8TB33 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01560Q8TB33 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01560Q8TB33 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 NCF1B-203ENST00000435988 1254 ntBASIC18.83■□□□□ 0.6
LINC01560Q8TB33 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01560Q8TB33 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 MFSD11-216ENST00000590393 1141 ntBASIC18.82■□□□□ 0.6
LINC01560Q8TB33 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.82■□□□□ 0.6
LINC01560Q8TB33 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01560Q8TB33 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 GPX1P1-201ENST00000388829 606 ntBASIC18.8■□□□□ 0.6
LINC01560Q8TB33 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01560Q8TB33 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01560Q8TB33 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms