Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.52■□□□□ 0.87
SNIP1Q8TAD8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNIP1Q8TAD8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 PRORSD1P-201ENST00000295112 541 ntBASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 MIR4758-201ENST00000577688 71 ntBASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 AC005224.4-201ENST00000583262 1652 ntBASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNIP1Q8TAD8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 CNN2P6-201ENST00000439038 900 ntBASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNIP1Q8TAD8 AC004687.1-201ENST00000579003 1625 ntBASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNIP1Q8TAD8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNIP1Q8TAD8 AC009237.3-201ENST00000393279 1427 ntBASIC20.48■□□□□ 0.87
SNIP1Q8TAD8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNIP1Q8TAD8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNIP1Q8TAD8 RNA5SP413-201ENST00000516373 109 ntBASIC20.48■□□□□ 0.87
SNIP1Q8TAD8 AP001160.3-201ENST00000601484 763 ntBASIC20.48■□□□□ 0.87
SNIP1Q8TAD8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.48■□□□□ 0.87
SNIP1Q8TAD8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNIP1Q8TAD8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 AP003733.4-201ENST00000623785 1697 ntBASIC20.47■□□□□ 0.87
SNIP1Q8TAD8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNIP1Q8TAD8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SNIP1Q8TAD8 AP006294.2-201ENST00000641667 209 ntBASIC20.46■□□□□ 0.87
SNIP1Q8TAD8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SNIP1Q8TAD8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 RPS2P52-201ENST00000469610 820 ntBASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms