Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 AC231657.2-201ENST00000624556 255 ntBASIC16.98■□□□□ 0.31
LINC01006Q8NI28 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.98■□□□□ 0.31
LINC01006Q8NI28 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01006Q8NI28 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 DUX4L16-201ENST00000555130 1264 ntBASIC16.96■□□□□ 0.31
LINC01006Q8NI28 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 UBE2DNL-204ENST00000602536 740 ntBASIC16.96■□□□□ 0.31
LINC01006Q8NI28 AL121832.2-201ENST00000610979 668 ntBASIC16.96■□□□□ 0.31
LINC01006Q8NI28 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LINC01006Q8NI28 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC01006Q8NI28 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.96■□□□□ 0.3
LINC01006Q8NI28 ANOS2P-203ENST00000472227 1816 ntBASIC16.96■□□□□ 0.3
LINC01006Q8NI28 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC01006Q8NI28 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.96■□□□□ 0.3
LINC01006Q8NI28 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.96■□□□□ 0.3
LINC01006Q8NI28 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 AC007322.1-201ENST00000426983 750 ntBASIC16.95■□□□□ 0.3
LINC01006Q8NI28 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 AC083906.2-201ENST00000511578 360 ntBASIC16.95■□□□□ 0.3
LINC01006Q8NI28 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 AP001160.3-201ENST00000601484 763 ntBASIC16.95■□□□□ 0.3
LINC01006Q8NI28 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01006Q8NI28 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 AC055733.4-201ENST00000638462 1354 ntBASIC16.94■□□□□ 0.3
LINC01006Q8NI28 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 ABHD17AP1-201ENST00000358206 933 ntBASIC16.94■□□□□ 0.3
LINC01006Q8NI28 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 AL050303.2-201ENST00000619798 666 ntBASIC16.94■□□□□ 0.3
LINC01006Q8NI28 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LINC01006Q8NI28 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 AC092068.2-201ENST00000590491 1708 ntBASIC16.93■□□□□ 0.3
LINC01006Q8NI28 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms