Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 AC087239.1-201ENST00000622671 572 ntBASIC20.3■□□□□ 0.84
NUP43Q8NFH3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP43Q8NFH3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP43Q8NFH3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.28■□□□□ 0.84
NUP43Q8NFH3 AC010141.3-201ENST00000456659 717 ntBASIC20.28■□□□□ 0.84
NUP43Q8NFH3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP43Q8NFH3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP43Q8NFH3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
NUP43Q8NFH3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NUP43Q8NFH3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP43Q8NFH3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 AL136162.1-201ENST00000607711 1078 ntBASIC20.25■□□□□ 0.83
NUP43Q8NFH3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP43Q8NFH3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 AC024257.2-201ENST00000549699 147 ntBASIC20.24■□□□□ 0.83
NUP43Q8NFH3 MIR4767-201ENST00000582827 78 ntBASIC20.24■□□□□ 0.83
NUP43Q8NFH3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NUP43Q8NFH3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms