Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 TERF1P2-201ENST00000583350 1212 ntBASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 AC139530.1-201ENST00000575312 1977 ntBASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF39Q8N4T4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARHGEF39Q8N4T4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ARHGEF39Q8N4T4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.52■□□□□ 0.88
ARHGEF39Q8N4T4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ARHGEF39Q8N4T4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.52■□□□□ 0.88
ARHGEF39Q8N4T4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.52■□□□□ 0.88
ARHGEF39Q8N4T4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.52■□□□□ 0.88
ARHGEF39Q8N4T4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ARHGEF39Q8N4T4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.52■□□□□ 0.87
ARHGEF39Q8N4T4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ARHGEF39Q8N4T4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 LINC02228-203ENST00000641970 1355 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 DUX4L2-201ENST00000561772 1275 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 CCDC92B-201ENST00000575506 885 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 DUX4L6-201ENST00000626483 1275 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 DUX4L1-201ENST00000627662 1275 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 DUX4L8-201ENST00000629013 1275 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 DUX4L3-201ENST00000630187 1275 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 DUX4L7-201ENST00000630678 1275 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 DUX4L5-201ENST00000630834 1275 ntBASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.51■□□□□ 0.87
ARHGEF39Q8N4T4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 AC080038.3-201ENST00000623346 1952 ntBASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF39Q8N4T4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 OR7E47P-201ENST00000546390 1422 ntBASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF39Q8N4T4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 MIR5787-201ENST00000611784 55 ntBASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF39Q8N4T4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms