Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.98■■□□□ 1.91
SMC5Q8IY18 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.98■■□□□ 1.91
SMC5Q8IY18 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SMC5Q8IY18 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.97■■□□□ 1.91
SMC5Q8IY18 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.97■■□□□ 1.91
SMC5Q8IY18 AL138724.1-201ENST00000606771 1088 ntBASIC26.97■■□□□ 1.91
SMC5Q8IY18 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SMC5Q8IY18 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SMC5Q8IY18 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.97■■□□□ 1.91
SMC5Q8IY18 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.97■■□□□ 1.91
SMC5Q8IY18 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SMC5Q8IY18 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
SMC5Q8IY18 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMC5Q8IY18 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.96■■□□□ 1.91
SMC5Q8IY18 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMC5Q8IY18 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.96■■□□□ 1.91
SMC5Q8IY18 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SMC5Q8IY18 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.96■■□□□ 1.91
SMC5Q8IY18 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SMC5Q8IY18 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.96■■□□□ 1.91
SMC5Q8IY18 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.96■■□□□ 1.91
SMC5Q8IY18 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMC5Q8IY18 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMC5Q8IY18 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMC5Q8IY18 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SMC5Q8IY18 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.96■■□□□ 1.91
SMC5Q8IY18 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SMC5Q8IY18 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SMC5Q8IY18 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
SMC5Q8IY18 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMC5Q8IY18 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMC5Q8IY18 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.95■■□□□ 1.9
SMC5Q8IY18 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.95■■□□□ 1.9
SMC5Q8IY18 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.95■■□□□ 1.9
SMC5Q8IY18 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.9
SMC5Q8IY18 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMC5Q8IY18 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
SMC5Q8IY18 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
SMC5Q8IY18 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMC5Q8IY18 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMC5Q8IY18 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.94■■□□□ 1.9
SMC5Q8IY18 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.94■■□□□ 1.9
SMC5Q8IY18 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMC5Q8IY18 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.94■■□□□ 1.9
SMC5Q8IY18 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMC5Q8IY18 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMC5Q8IY18 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SMC5Q8IY18 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMC5Q8IY18 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMC5Q8IY18 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SMC5Q8IY18 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMC5Q8IY18 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.93■■□□□ 1.9
SMC5Q8IY18 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.93■■□□□ 1.9
SMC5Q8IY18 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
SMC5Q8IY18 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC26.93■■□□□ 1.9
SMC5Q8IY18 SYT6-210ENST00000641643 1587 ntBASIC26.92■■□□□ 1.9
SMC5Q8IY18 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
SMC5Q8IY18 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SMC5Q8IY18 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SMC5Q8IY18 AC026310.3-201ENST00000625186 2373 ntBASIC26.92■■□□□ 1.9
SMC5Q8IY18 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.92■■□□□ 1.9
SMC5Q8IY18 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.92■■□□□ 1.9
SMC5Q8IY18 AC136469.2-201ENST00000623944 1028 ntBASIC26.92■■□□□ 1.9
SMC5Q8IY18 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SMC5Q8IY18 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMC5Q8IY18 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMC5Q8IY18 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMC5Q8IY18 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMC5Q8IY18 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.91■■□□□ 1.9
SMC5Q8IY18 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
SMC5Q8IY18 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.91■■□□□ 1.9
SMC5Q8IY18 DUX4L19-201ENST00000557448 1267 ntBASIC26.91■■□□□ 1.9
SMC5Q8IY18 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.91■■□□□ 1.9
SMC5Q8IY18 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
SMC5Q8IY18 AC011298.3-201ENST00000615796 283 ntBASIC26.91■■□□□ 1.9
SMC5Q8IY18 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.91■■□□□ 1.9
SMC5Q8IY18 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMC5Q8IY18 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
SMC5Q8IY18 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMC5Q8IY18 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.91■■□□□ 1.9
SMC5Q8IY18 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
SMC5Q8IY18 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.9■■□□□ 1.9
SMC5Q8IY18 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.9■■□□□ 1.9
SMC5Q8IY18 AC026471.6-201ENST00000622954 1905 ntBASIC26.9■■□□□ 1.9
SMC5Q8IY18 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMC5Q8IY18 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMC5Q8IY18 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMC5Q8IY18 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.89■■□□□ 1.9
SMC5Q8IY18 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.89■■□□□ 1.9
SMC5Q8IY18 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.89■■□□□ 1.9
SMC5Q8IY18 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.89■■□□□ 1.9
SMC5Q8IY18 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.89■■□□□ 1.9
SMC5Q8IY18 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SMC5Q8IY18 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SMC5Q8IY18 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SMC5Q8IY18 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.88■■□□□ 1.89
SMC5Q8IY18 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMC5Q8IY18 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
SMC5Q8IY18 AC244015.2-201ENST00000616358 1861 ntBASIC26.88■■□□□ 1.89
SMC5Q8IY18 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms