Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 AC007375.3-201ENST00000600936 2314 ntBASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC00346Q8IVM7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC00346Q8IVM7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LINC00346Q8IVM7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LINC00346Q8IVM7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
LINC00346Q8IVM7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LINC00346Q8IVM7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LINC00346Q8IVM7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
LINC00346Q8IVM7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.14■□□□□ 0.66
LINC00346Q8IVM7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LINC00346Q8IVM7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 AC092171.4-201ENST00000609130 632 ntBASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 AL031602.1-201ENST00000633169 911 ntBASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00346Q8IVM7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 AC131281.2-201ENST00000520478 145 ntBASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LINC00346Q8IVM7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00346Q8IVM7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 SERBP1P1-201ENST00000396021 1160 ntBASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 AC010525.1-201ENST00000585559 441 ntBASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00346Q8IVM7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 SYT6-210ENST00000641643 1587 ntBASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 AC010542.4-201ENST00000563151 1910 ntBASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms