Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL23A1Q86Y22 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 AC068338.2-201ENST00000563278 1430 ntBASIC27.59■■■□□ 2.01
COL23A1Q86Y22 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
COL23A1Q86Y22 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 ADM-205ENST00000528544 586 ntTSL 2 BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL23A1Q86Y22 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.58■■■□□ 2
COL23A1Q86Y22 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
COL23A1Q86Y22 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL23A1Q86Y22 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.57■■■□□ 2
COL23A1Q86Y22 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL23A1Q86Y22 CYP2T1P-201ENST00000432607 1285 ntBASIC27.57■■■□□ 2
COL23A1Q86Y22 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL23A1Q86Y22 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.57■■■□□ 2
COL23A1Q86Y22 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.57■■■□□ 2
COL23A1Q86Y22 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL23A1Q86Y22 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL23A1Q86Y22 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL23A1Q86Y22 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.56■■■□□ 2
COL23A1Q86Y22 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.56■■■□□ 2
COL23A1Q86Y22 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL23A1Q86Y22 AC010141.2-201ENST00000452426 721 ntBASIC27.56■■■□□ 2
COL23A1Q86Y22 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL23A1Q86Y22 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.56■■■□□ 2
COL23A1Q86Y22 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL23A1Q86Y22 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.56■■■□□ 2
COL23A1Q86Y22 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
COL23A1Q86Y22 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC27.55■■■□□ 2
COL23A1Q86Y22 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
COL23A1Q86Y22 ESRRAP1-201ENST00000400596 1257 ntBASIC27.55■■■□□ 2
COL23A1Q86Y22 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC27.55■■■□□ 2
COL23A1Q86Y22 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC27.55■■■□□ 2
COL23A1Q86Y22 AC083880.1-201ENST00000608266 535 ntBASIC27.55■■■□□ 2
COL23A1Q86Y22 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
COL23A1Q86Y22 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
COL23A1Q86Y22 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
COL23A1Q86Y22 KRT18P20-201ENST00000548986 1279 ntBASIC27.54■■■□□ 2
COL23A1Q86Y22 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.54■■■□□ 2
COL23A1Q86Y22 AC092118.2-201ENST00000613495 667 ntBASIC27.54■■■□□ 2
COL23A1Q86Y22 AC013268.1-206ENST00000638368 961 ntBASIC27.54■■■□□ 2
COL23A1Q86Y22 AC055733.4-201ENST00000638462 1354 ntBASIC27.54■■■□□ 2
COL23A1Q86Y22 AC112229.1-201ENST00000639295 961 ntBASIC27.54■■■□□ 2
COL23A1Q86Y22 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.53■■■□□ 2
COL23A1Q86Y22 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.53■■■□□ 2
COL23A1Q86Y22 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
COL23A1Q86Y22 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.53■■■□□ 2
COL23A1Q86Y22 AL158047.1-201ENST00000445918 881 ntBASIC27.53■■■□□ 2
COL23A1Q86Y22 AC093787.1-201ENST00000450396 207 ntBASIC27.53■■■□□ 2
COL23A1Q86Y22 TERF1P5-201ENST00000477545 1207 ntBASIC27.53■■■□□ 2
COL23A1Q86Y22 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC27.53■■■□□ 2
COL23A1Q86Y22 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC27.53■■■□□ 2
COL23A1Q86Y22 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
COL23A1Q86Y22 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL23A1Q86Y22 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
COL23A1Q86Y22 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.53■■■□□ 2
COL23A1Q86Y22 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
COL23A1Q86Y22 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.52■■■□□ 2
COL23A1Q86Y22 AL353803.4-201ENST00000565882 1934 ntBASIC27.52■■■□□ 2
COL23A1Q86Y22 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.52■■■□□ 2
COL23A1Q86Y22 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC27.52■■■□□ 2
COL23A1Q86Y22 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
COL23A1Q86Y22 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
COL23A1Q86Y22 RPS2P4-201ENST00000476944 856 ntBASIC27.52■■■□□ 2
COL23A1Q86Y22 AC138907.5-202ENST00000569484 235 ntBASIC27.52■■■□□ 2
COL23A1Q86Y22 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.52■■■□□ 2
COL23A1Q86Y22 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 IRX5-204ENST00000560154 879 ntTSL 5 BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
COL23A1Q86Y22 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
COL23A1Q86Y22 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms