Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 AC026310.3-201ENST00000625186 2373 ntBASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 OR2I1P-207ENST00000453522 948 ntBASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3HC1Q86WB0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 AL356441.2-201ENST00000443009 864 ntBASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 AC092171.4-201ENST00000609130 632 ntBASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.55■■□□□ 1.04
ZC3HC1Q86WB0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3HC1Q86WB0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 AC068587.7-201ENST00000641602 218 ntBASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.53■■□□□ 1.04
ZC3HC1Q86WB0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 AC244015.2-201ENST00000616358 1861 ntBASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.52■■□□□ 1.04
ZC3HC1Q86WB0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
ZC3HC1Q86WB0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms