Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 AC135279.3-201ENST00000610945 1311 ntBASIC19.72■□□□□ 0.75
ATG4DQ86TL0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 SLC47A1P1-202ENST00000449666 945 ntBASIC19.71■□□□□ 0.75
ATG4DQ86TL0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 AL031432.3-201ENST00000607698 485 ntBASIC19.71■□□□□ 0.75
ATG4DQ86TL0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATG4DQ86TL0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 AC087239.1-201ENST00000622671 572 ntBASIC19.7■□□□□ 0.74
ATG4DQ86TL0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4DQ86TL0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 AC010141.3-201ENST00000456659 717 ntBASIC19.69■□□□□ 0.74
ATG4DQ86TL0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4DQ86TL0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 AC133561.4-201ENST00000566112 224 ntBASIC19.68■□□□□ 0.74
ATG4DQ86TL0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.68■□□□□ 0.74
ATG4DQ86TL0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 MIR4767-201ENST00000582827 78 ntBASIC19.67■□□□□ 0.74
ATG4DQ86TL0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATG4DQ86TL0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.66■□□□□ 0.74
ATG4DQ86TL0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATG4DQ86TL0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATG4DQ86TL0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATG4DQ86TL0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATG4DQ86TL0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
ATG4DQ86TL0 AP005435.1-201ENST00000529293 1178 ntBASIC19.66■□□□□ 0.74
ATG4DQ86TL0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.66■□□□□ 0.74
ATG4DQ86TL0 OXCT2P1-201ENST00000447263 1535 ntBASIC19.66■□□□□ 0.74
ATG4DQ86TL0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATG4DQ86TL0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATG4DQ86TL0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATG4DQ86TL0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATG4DQ86TL0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATG4DQ86TL0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATG4DQ86TL0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms