Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 AF201337.1-201ENST00000520239 748 ntBASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 AC142381.3-201ENST00000568208 1670 ntBASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 KRT87P-202ENST00000534226 1464 ntBASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 POU5F1P3-201ENST00000428824 1078 ntBASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 SMUG1P1-201ENST00000590640 811 ntBASIC13.53□□□□□ -0.24
VPS13BQ7Z7G8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13BQ7Z7G8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13BQ7Z7G8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13BQ7Z7G8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.52□□□□□ -0.24
VPS13BQ7Z7G8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
VPS13BQ7Z7G8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13BQ7Z7G8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13BQ7Z7G8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 TSPY6P-201ENST00000448518 926 ntBASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13BQ7Z7G8 AC105036.2-201ENST00000569468 176 ntBASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 ITM2C-210ENST00000620962 501 ntBASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS13BQ7Z7G8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 FAM201B-201ENST00000458407 597 ntBASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 AC083880.1-201ENST00000608266 535 ntBASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13BQ7Z7G8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 MYC-209ENST00000641252 345 ntBASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 AC007322.4-201ENST00000509611 723 ntBASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 AC087239.1-201ENST00000622671 572 ntBASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms