Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 RWDD4P1-201ENST00000488019 565 ntBASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 AF213884.3-201ENST00000563833 479 ntBASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 AL499627.2-201ENST00000606283 725 ntBASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 AL136967.2-201ENST00000623968 743 ntBASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 LINC01529-204ENST00000636474 1715 ntBASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PPP4R3CPQ6ZMV5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.51■■□□□ 1.51
PPP4R3CPQ6ZMV5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 RPAP2P1-201ENST00000603626 1168 ntBASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 FGA-203ENST00000622532 1130 ntTSL 5 BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PPP4R3CPQ6ZMV5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PPP4R3CPQ6ZMV5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC240504.1-201ENST00000395709 845 ntBASIC24.48■■□□□ 1.51
PPP4R3CPQ6ZMV5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC24.48■■□□□ 1.51
PPP4R3CPQ6ZMV5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 C1orf229-201ENST00000623686 2258 ntBASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 SEPT7P7-201ENST00000420492 1301 ntBASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC091305.1-201ENST00000479476 895 ntBASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC090953.1-201ENST00000604305 1092 ntBASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.47■■□□□ 1.51
PPP4R3CPQ6ZMV5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 VN1R53P-201ENST00000429536 957 ntBASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 AC027682.1-201ENST00000562846 899 ntBASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.46■■□□□ 1.51
PPP4R3CPQ6ZMV5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
PPP4R3CPQ6ZMV5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
PPP4R3CPQ6ZMV5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 USP9YP2-201ENST00000504503 1000 ntBASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 USP9YP1-201ENST00000513521 1002 ntBASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.45■■□□□ 1.5
PPP4R3CPQ6ZMV5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 RASA4CP-201ENST00000424092 1398 ntBASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 BX842568.3-201ENST00000418104 571 ntBASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms