Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 AC004854.2-201ENST00000608450 1441 ntBASIC23.25■■□□□ 1.31
DCLRE1AQ6PJP8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DCLRE1AQ6PJP8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DCLRE1AQ6PJP8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCLRE1AQ6PJP8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
DCLRE1AQ6PJP8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.23■■□□□ 1.31
DCLRE1AQ6PJP8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.23■■□□□ 1.31
DCLRE1AQ6PJP8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.23■■□□□ 1.31
DCLRE1AQ6PJP8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DCLRE1AQ6PJP8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCLRE1AQ6PJP8 AC005224.4-201ENST00000583262 1652 ntBASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 AC079140.4-201ENST00000507448 529 ntBASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DCLRE1AQ6PJP8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.21■■□□□ 1.31
DCLRE1AQ6PJP8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DCLRE1AQ6PJP8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.21■■□□□ 1.31
DCLRE1AQ6PJP8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCLRE1AQ6PJP8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCLRE1AQ6PJP8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.21■■□□□ 1.31
DCLRE1AQ6PJP8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCLRE1AQ6PJP8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DCLRE1AQ6PJP8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
DCLRE1AQ6PJP8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 KRT19P1-201ENST00000405746 1186 ntBASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.2■■□□□ 1.3
DCLRE1AQ6PJP8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 AC006015.1-201ENST00000429970 570 ntBASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 AC137761.2-201ENST00000561729 223 ntBASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 AC145350.3-201ENST00000569033 163 ntBASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DCLRE1AQ6PJP8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.18■■□□□ 1.3
DCLRE1AQ6PJP8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DCLRE1AQ6PJP8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms