Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNKSR3Q6P9H4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CNKSR3Q6P9H4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 AC069152.1-201ENST00000438030 544 ntBASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNKSR3Q6P9H4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CNKSR3Q6P9H4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CNKSR3Q6P9H4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CNKSR3Q6P9H4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.58■■□□□ 1.37
CNKSR3Q6P9H4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CNKSR3Q6P9H4 AF201337.1-201ENST00000520239 748 ntBASIC23.58■■□□□ 1.37
CNKSR3Q6P9H4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CNKSR3Q6P9H4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CNKSR3Q6P9H4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CNKSR3Q6P9H4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 CNN2P6-201ENST00000439038 900 ntBASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 AC133041.1-202ENST00000642053 222 ntBASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CNKSR3Q6P9H4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 AC055733.4-201ENST00000638462 1354 ntBASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 MIR4651-201ENST00000582622 73 ntBASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CNKSR3Q6P9H4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 AC073210.2-201ENST00000430369 194 ntBASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 AC133552.2-202ENST00000575694 574 ntBASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CNKSR3Q6P9H4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 KRT18P20-201ENST00000548986 1279 ntBASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 AC105036.2-201ENST00000569468 176 ntBASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNKSR3Q6P9H4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 AC010141.2-201ENST00000452426 721 ntBASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 FAM201B-201ENST00000458407 597 ntBASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 AC010536.3-201ENST00000620306 533 ntBASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.53■■□□□ 1.36
CNKSR3Q6P9H4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.52■■□□□ 1.36
CNKSR3Q6P9H4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CNKSR3Q6P9H4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.52■■□□□ 1.36
CNKSR3Q6P9H4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.52■■□□□ 1.36
CNKSR3Q6P9H4 AC138907.5-202ENST00000569484 235 ntBASIC23.52■■□□□ 1.36
CNKSR3Q6P9H4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CNKSR3Q6P9H4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CNKSR3Q6P9H4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNKSR3Q6P9H4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNKSR3Q6P9H4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNKSR3Q6P9H4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CNKSR3Q6P9H4 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.51■■□□□ 1.35
CNKSR3Q6P9H4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms