Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.33■□□□□ 0.2
MRPL54Q6P161 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.33■□□□□ 0.2
MRPL54Q6P161 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.33■□□□□ 0.2
MRPL54Q6P161 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL54Q6P161 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL54Q6P161 AC131274.2-201ENST00000580697 1507 ntBASIC16.33■□□□□ 0.2
MRPL54Q6P161 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.33■□□□□ 0.2
MRPL54Q6P161 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.33■□□□□ 0.2
MRPL54Q6P161 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL54Q6P161 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL54Q6P161 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.33■□□□□ 0.2
MRPL54Q6P161 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL54Q6P161 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL54Q6P161 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL54Q6P161 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MRPL54Q6P161 LINC01006-201ENST00000333319 2292 ntBASIC16.32■□□□□ 0.2
MRPL54Q6P161 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPL54Q6P161 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPL54Q6P161 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.32■□□□□ 0.2
MRPL54Q6P161 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPL54Q6P161 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPL54Q6P161 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL54Q6P161 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPL54Q6P161 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MRPL54Q6P161 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 Z98882.1-201ENST00000622160 2253 ntBASIC16.31■□□□□ 0.2
MRPL54Q6P161 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MRPL54Q6P161 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.31■□□□□ 0.2
MRPL54Q6P161 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
MRPL54Q6P161 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MRPL54Q6P161 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL54Q6P161 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPL54Q6P161 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MRPL54Q6P161 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MRPL54Q6P161 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
MRPL54Q6P161 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPL54Q6P161 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MRPL54Q6P161 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MRPL54Q6P161 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL54Q6P161 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL54Q6P161 FEM1AP4-201ENST00000443167 1987 ntBASIC16.29■□□□□ 0.2
MRPL54Q6P161 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MRPL54Q6P161 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MRPL54Q6P161 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL54Q6P161 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL54Q6P161 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL54Q6P161 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL54Q6P161 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.29■□□□□ 0.2
MRPL54Q6P161 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL54Q6P161 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPL54Q6P161 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.29■□□□□ 0.2
MRPL54Q6P161 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPL54Q6P161 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL54Q6P161 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPL54Q6P161 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPL54Q6P161 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
MRPL54Q6P161 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms