Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 MIR4466-201ENST00000606121 54 ntBASIC19.77■□□□□ 0.76
ZNF544Q6NX49 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF544Q6NX49 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.77■□□□□ 0.75
ZNF544Q6NX49 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
ZNF544Q6NX49 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 ESRRAP2-201ENST00000418437 1549 ntBASIC19.76■□□□□ 0.75
ZNF544Q6NX49 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 AC005703.6-201ENST00000623265 1329 ntBASIC19.76■□□□□ 0.75
ZNF544Q6NX49 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ZNF544Q6NX49 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF544Q6NX49 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 AC242852.2-201ENST00000615738 1807 ntBASIC19.74■□□□□ 0.75
ZNF544Q6NX49 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF544Q6NX49 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF544Q6NX49 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF544Q6NX49 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms